LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy1g1432	ATGGATGTTTTCTATTTTGTTGCTCTTATTTTCATGTTGAGCTTCCATATTCATTTTACTCGAGGAAGTGTACTGAACCCCACCACTGAGAAAACTGAGACAAACAGTTTTCAAACATACATTATCCATGTGAGAAAGCCAGAGAGTAAGATATTCACGCAGTCAGAAGATTTGATAAACTGGCACAACTCATTCATGCCGCCACCTGCCACTACGACGAGCACTAAGGAACAGCCAAGAAAAATGCTTTATTCGTACCGGAATGTGCTGAGTGGTTTTGCTGCAAGACTCACTGAAGAGGAGCTGAGAGAGGTGGAAAAGAAGGATGGTTTTATCTCAGCTCATCCACAAAGGATACTCCATCGTCAAACGACGCATACCCCAGAATTCTTGGGGCTGCAGCAACAAATGGGACTGTGGAAACAATCAAATCTCGGCAAGGGGGTTATTATTGGGGTGGTGGACTCTGGCATCACACCTAATCATCCTTCGTTCAATGATGCAGGAATGCCGCCCCCACCTCCGAAATGGAAAGGGAAATGCGAACTAAATGAAACAGCTTGTAACAACAAACTAATTGGTGCAAGGACTTTCAACATTGCAGCTACAGCAACGAATGGAACTCAAAATGTGCCACCTATTGATGAAGATGGACATGGGACTCACACAAGCAGCACTGCAGCTGGTGCCTTTGTGGATTATGCAGAAGTATTGGGAAATGCCAAAGGCACAGCTACAGGGATGGCTCCTTTGGCTCACGTGGCAATGTATAGAGTATGCTTCGGAGATCCCTGCCCCGAGGCTGATATACTGGCAGCATTAGATGCAGCCGTGGAGGATGGGGTCGATATAATATCAATATCTCTTGGCCTAAGCGAGCCCCCTCCATTTTACAATGATAGCACTGCAATAGGTGCATTTGCAGCAATTCAGAAAGGAATATTTGTAAGTTGTGCAGGAGGAAATCTTGGCCCCTCTAATAGCACTATAGTTAATGGAGCCCCATGGATTCTCACTGTTGGAGCAAGCACTATTGACAGAACCATTGTAGCAACAGCGAAGCTTGGAAATGGGGAAGAATTTGATGGTGAATCTGTTTTCCAGCCTTCCAGTTTTCCTTCAACATTGCTGCCCTTGGCATATGCTGGCAAGAATGGCAACCAACAATCTGCATTATGCGCTAACAGATCCTTGAGTGACACCGACTTCAGAGGAAAAGTTGTTTTGTGCGAAAGAGGAGGAGGAATAGCAAGAATTGCAAAAGGGGATGAAGTGAGAAGAGCTGGTGGGGCTGCCATGATTCTCATGAATGATGAAATCAGTGGCTTCAGTCTATCAGCTGATGTACATGTGTTACCTGCAACACATGTAAGCTATGCTGCTGGATTGAAGATAAAAGGCTATATAAATTCCACCGCGACACCTACAGCAACCATTTTATTTAAGGGAACTATCATCGGAAACTCCCTGGCTCCTGCTGTTACATCCTTCTCATCAAGAGGTCCGAATTTGCCGAGTCCTGGTATTTTGAAGCCAGATATCATAGGGCCAGGCAGTAGCATATTAGCTGCCTGGCCATTCCCCCTCGACAACAGCACTGATTCTAAATCCACCTTCAACATTATGTCCGGCACATCAATGGCATGCCCACATCTCAGCGGAATTGCTGCTTTGCTAAAAAGCTCTCATCCTGACTGGTCACCAGCAGCCATTAAATCTGCCATAATGACTTCTGCAGACACGCTAAATTTAGAACACACACCCATCGTTGATGAGAGAAATCAACCTGCAGATCTCTTTGCCACAGGTTCCGGCCATGTGAATCCATCGAGAGCAAATGATCCAGGACTAGTTTATGATATTGAACCTGATGATTATATACCTTATCTTTGTGGTTTAGGCTACAATAATAGGGAAATTGGGTACCTTGCACAGAGAACAATTAAGTGCTCTGAAACATCAAGCATTCCTGAAGCACAACTCAATTATCCCTCATTTTCTATTGCACTTGGTTCCTCGCAGACATTCACAAGGACTGTGACAAATGTTGGTGAGGCCTATTCATCTTATGATGTCATGGTTACAGCACCAGAAGGGGTTTCTGTGACAATCCAGCCAAATAAACTTAACTTTTCGGAAATAAACCAAAAAGAGACATATTCAGTGGCATTCAGCCGTACAGATTCAGCTAATAAGACAGCAGATTATGCTCAAGGGTCACTAGCATGGGTCTCTGCCAAACACATTGTAAGAAGCCCTATCTTGGTAAAGTTTGTATAA	2280	0.4434	MDVFYFVALIFMLSFHIHFTRGSVLNPTTEKTETNSFQTYIIHVRKPESKIFTQSEDLINWHNSFMPPPATTTSTKEQPRKMLYSYRNVLSGFAARLTEEELREVEKKDGFISAHPQRILHRQTTHTPEFLGLQQQMGLWKQSNLGKGVIIGVVDSGITPNHPSFNDAGMPPPPPKWKGKCELNETACNNKLIGARTFNIAATATNGTQNVPPIDEDGHGTHTSSTAAGAFVDYAEVLGNAKGTATGMAPLAHVAMYRVCFGDPCPEADILAALDAAVEDGVDIISISLGLSEPPPFYNDSTAIGAFAAIQKGIFVSCAGGNLGPSNSTIVNGAPWILTVGASTIDRTIVATAKLGNGEEFDGESVFQPSSFPSTLLPLAYAGKNGNQQSALCANRSLSDTDFRGKVVLCERGGGIARIAKGDEVRRAGGAAMILMNDEISGFSLSADVHVLPATHVSYAAGLKIKGYINSTATPTATILFKGTIIGNSLAPAVTSFSSRGPNLPSPGILKPDIIGPGSSILAAWPFPLDNSTDSKSTFNIMSGTSMACPHLSGIAALLKSSHPDWSPAAIKSAIMTSADTLNLEHTPIVDERNQPADLFATGSGHVNPSRANDPGLVYDIEPDDYIPYLCGLGYNNREIGYLAQRTIKCSETSSIPEAQLNYPSFSIALGSSQTFTRTVTNVGEAYSSYDVMVTAPEGVSVTIQPNKLNFSEINQKETYSVAFSRTDSANKTADYAQGSLAWVSAKHIVRSPILVKFV*	760

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy1g1432	759	ProSiteProfiles	Serine proteases, subtilase domain profile.	130	613	-	-
Ahy1g1432	759	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	151	162	IPR023827	-
Ahy1g1432	759	Gene3D	-	346	487	-	-
Ahy1g1432	759	Pfam	Peptidase inhibitor I9	39	120	IPR010259	-
Ahy1g1432	759	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	35	756	IPR045051	-
Ahy1g1432	759	CDD	Peptidases_S8_3	120	580	IPR034197	-
Ahy1g1432	759	Pfam	Fibronectin type-III domain	660	756	IPR041469	-
Ahy1g1432	759	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.7	35	756	-	-
Ahy1g1432	759	Pfam	Subtilase family	146	582	IPR000209	GO:0006508\|GO:0008236
Ahy1g1432	759	Gene3D	-	630	758	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy1g1432	Ahy-Chr1	51028421	51031587	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy1g1432	5	756	Subtilisin-like Serine Gene Family	AT1G04110	42.239	0.0	601

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy1g1432	-		-	gmx:100812208	1191.79

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy11g1472	11	62754204	62757135	Ahy1g1432	1	51028421	51031587	hybridization
	Ahy1g1432	1	51028421	51031587	Ahy5g0921	5	13010219	13012471	PCT

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