Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1428 ATGGGAAGGCAACCTTGTTGTGATAAACTTGGTGTGAAGAAAGGACCATGGACTGCTGAGGAAGACAAGAAGCTTATAAACTTTATTCTCACAAATGGGCAGTGCTGCTGGCGTGCTGTGCCCAAGCTGGCCGGCCTCCGCCGATGCGGCAAGAGCTGCCGCCTTCGCTGGACTAATTACCTTCGCCCGGACTTAAAGAGAGGACTCCTCACTCAGGCAGAGGAGCAGCTTGTTATTGATCTTCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCAGCAAGGTTACCAGGAAGAACAGACAATGAGATCAAGAATCATTGGAACACACACATCAAGAAAAAGCTTCTTAAGATGGGGATTGACCCTGTCACTCATGTACCTCTCAATAAAAAGGAAAGTTCCTCCCCTGAAGACCAAAAGAATCTGCAACAACAAGAGCCTAAGGAAGGTAATAATGGGGATCTCAACTCTGAGGAAAATAATTCAAATTCATCATCCCCAACTGAAAATTCTTCTTCAGGAGAAGAATCTCTTTTGCTAGATAGCATTTGCAGCGATGATTCTCTAATGATGGATAATTTATGGATGGATCATGAAAATACACTGGTGGATGAATTGTTATGGGACACTACCCCTAAAGTGGAGGGCACAAATACAAACACAAACAATGTTGACATGGGACTCACAGTGCCATCTTGGGAGGATAATAATAATTATGCTTGGTTATTGGACTTTGAGGACATTGGTGTTCATGATTTTGGTTTTAATTATTGTTTCAATGAGATAGATCATTCAAATGCAATGCAAACTATAGGAAGTGAAAGAAAAGGGTCTTTAGCGTGA 846 0.4279 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHVPLNKKESSSPEDQKNLQQQEPKEGNNGDLNSEENNSNSSSPTENSSSGEESLLLDSICSDDSLMMDNLWMDHENTLVDELLWDTTPKVEGTNTNTNNVDMGLTVPSWEDNNNYAWLLDFEDIGVHDFGFNYCFNEIDHSNAMQTIGSERKGSLA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1428 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy1g1428 281 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy1g1428 281 MobiDBLite consensus disorder prediction 127 177 - -
Ahy1g1428 281 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 238 - -
Ahy1g1428 281 Gene3D - 12 67 - -
Ahy1g1428 281 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy1g1428 281 CDD SANT 16 61 IPR001005 -
Ahy1g1428 281 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy1g1428 281 SMART sant 13 63 IPR001005 -
Ahy1g1428 281 SMART sant 66 114 IPR001005 -
Ahy1g1428 281 MobiDBLite consensus disorder prediction 139 177 - -
Ahy1g1428 281 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 1 238 - -
Ahy1g1428 281 CDD SANT 71 112 IPR001005 -
Ahy1g1428 281 Gene3D - 70 172 - -
Ahy1g1428 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy1g1428 281 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy1g1428 281 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1428 Ahy-Chr1 50132704 50134729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1428 1 256 MYB Transcription Factor Family AT4G22680 58.333 2.18e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy1g1428 Myb_DNA-binding 3.00E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1428 K09422 - gmx:100786965 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1468 11 62254115 62256236 Ahy1g1428 1 50132704 50134729 hybridization