Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1420 ATGAACTCCTTTCATTTCCTCCTGCTACTTTCATTTTTTCCATTTCTTGCACTTCTTATTAGTCCAAAATTAGTTCATGGAAATGCAGAGCTAAGAGCTCTCATGGACCTGAAATCCTCTCTAGACCCAGAAGGCAAGGTTCTTGGTTCATGGAGAAGTGATGGTGATCCATGCACTGATTCCTTCTTAGGTGTTGCTTGCAACCAGCACCGAAAAGTGGCCAACATATCGTTGGCCGGAAGGGGTCTTTCCGGCATGGTTTCTCCTTCGGTGGCTGAACTTAAGTGCTTGTCTGGTTTATATCTTCATTACAACATCATTTTCGGGGAGATACCAATAGAGATTTCGAATCTCACTGAATTGGTTGATCTCTATCTCAATGTAAATAACCTATCTGGTAGCATTCCAAAGGAGATTGGAAAAATGACTAGCCTACAAGTGCTTCAGTTAGGCTTTAACCAGCTAGTTGGGAGCATACCGAAGGAGATCGGTTCATTGAAGCAGCTTAATGTTCTGGCTTTGCAACATAACAAATTAACTGGTATGATTCCTCCAAGCTTGGGGAACCTAGAAATGCTAAGGAGGCTAAATTTGAGCTTCAACAACCTCAATGGGGTAATTCCTGCAACATTAGCTGATATTGCACACTTGGAAGTTCTAGATGTTCAAAACAATTCTCTATCAGGAGTTGTCCCTTCTGCATTGAGGAAACTTGATAAAGGATTTCAATATGCAAACAATCAAGGTCTGTGCGCCATGGGGTTTCGGTTTCCGACCTTGAGAGCTTGCAACAAAGATAGTATATATGATAGCCAGATTAGTGTCCCAAATATACCAATAAACAGTTCTTATCCAAAGGTTTTCCCTGACTCTGCCACTATCAAGTTTCATTGTAACCAGACTCAATGCTCAAAATCAAGAAGATTTCCTCAAGCTGTCATTGCAGCAAGTGTTATAACCGCCACAATCACACTAATAGGTTCTGGGTTTGTCACATTCGTCAGATATCGCCGGAGAAAGCAGAGGATCCTGCATACGTCGGATTCTTCTGTAAGCCAACTTAGCCCTGTCCAACCTATGGTCTACACAAGAAGTCCATCTCCACTTGTTAATCTTGAGTATTACAACAATGGATTGGATCCACTTGCTGATGGTAAAAATTGCAGTGGATTATCCCATGAATATCTAAACAAGTTTAGGTTCAATGTGGATGAGATTGAATCAGCAACACAATATCTTTCAGAGGCCAATTTATTGGGTAAGAGCAAATTCTCTGCCGTCTACAAAGGAGTTCTCAGAGATGGTTCTCCTGTGGCCATCAGAAGTATTAATGTGACATGCTGCATACCTGAGGAAGTTGAATTCTTGAAGGGATTGAGCCTGCTAACCTCACTGAGACATGAAAACATTGTAAAGATGAGAGGTTTTTGTTGCTCAAGTAGTAGAGGTGAATGTTACCTTGTCTACGATTTTGTAACCGGTGGCACTCTCTCTATATATCTTGATATGGAAGATGGAAGTGAAAATGTGCTTGAGTGGTCTAAGAGGGTTTCCATCATCAAGGGCATTGCAAAAGGTCTTGCATATCTGCACAGCAATGAAGCAAGCAAACCTACAATAGTTCACCAAAATATTTCAGTTGAAAAAGTTCTTCTTGACAATCAGTTTAACCCATTGATCATGGATGCTGGGCTCCCCAAGCTTCTAGCAGACGACATTGTTTTCTCGGCACTGAAAGTTAGTGCTGCCATGGGATACCTAGCTCCTGAATACGTTACCACTGGACGCTTCACCGAGAAGAGCGACGTTTATGCATTCGGTGTCATTGTTCTTCAAGTCCTGTCTGGGAAGACAACAGTAGGGGGTTCAATCAGAATGGCAGTTGAGTCTTTCAGATTTGATGATTTTGTGGACACAAATCTAAAGGGAAAATATTCGAAAGCAGAAGCAGCAATTCTTTCAAAGATTGCAGTGATGTGCACTCATGAGCTTTCTGAGCAAAGGCCAAACATGGTGGAGGTGATTCAGGAACTAAGCATGTATTCTTCTCATTCTTCATGA 2061 0.4168 MNSFHFLLLLSFFPFLALLISPKLVHGNAELRALMDLKSSLDPEGKVLGSWRSDGDPCTDSFLGVACNQHRKVANISLAGRGLSGMVSPSVAELKCLSGLYLHYNIIFGEIPIEISNLTELVDLYLNVNNLSGSIPKEIGKMTSLQVLQLGFNQLVGSIPKEIGSLKQLNVLALQHNKLTGMIPPSLGNLEMLRRLNLSFNNLNGVIPATLADIAHLEVLDVQNNSLSGVVPSALRKLDKGFQYANNQGLCAMGFRFPTLRACNKDSIYDSQISVPNIPINSSYPKVFPDSATIKFHCNQTQCSKSRRFPQAVIAASVITATITLIGSGFVTFVRYRRRKQRILHTSDSSVSQLSPVQPMVYTRSPSPLVNLEYYNNGLDPLADGKNCSGLSHEYLNKFRFNVDEIESATQYLSEANLLGKSKFSAVYKGVLRDGSPVAIRSINVTCCIPEEVEFLKGLSLLTSLRHENIVKMRGFCCSSSRGECYLVYDFVTGGTLSIYLDMEDGSENVLEWSKRVSIIKGIAKGLAYLHSNEASKPTIVHQNISVEKVLLDNQFNPLIMDAGLPKLLADDIVFSALKVSAAMGYLAPEYVTTGRFTEKSDVYAFGVIVLQVLSGKTTVGGSIRMAVESFRFDDFVDTNLKGKYSKAEAAILSKIAVMCTHELSEQRPNMVEVIQELSMYSSHSS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1420 686 SUPERFAMILY L domain-like 30 238 - -
Ahy1g1420 686 Gene3D Ribonuclease Inhibitor 27 265 IPR032675 -
Ahy1g1420 686 Pfam Protein tyrosine and serine/threonine kinase 417 678 IPR001245 GO:0004672|GO:0006468
Ahy1g1420 686 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Ahy1g1420 686 Gene3D Phosphorylase Kinase; domain 1 384 491 - -
Ahy1g1420 686 SUPERFAMILY Protein kinase-like (PK-like) 389 680 IPR011009 -
Ahy1g1420 686 SMART LRR_typ_2 214 237 IPR003591 -
Ahy1g1420 686 SMART LRR_typ_2 190 213 IPR003591 -
Ahy1g1420 686 SMART LRR_typ_2 142 166 IPR003591 -
Ahy1g1420 686 SMART LRR_typ_2 118 141 IPR003591 -
Ahy1g1420 686 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 682 - -
Ahy1g1420 686 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Ahy1g1420 686 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 9 682 - -
Ahy1g1420 686 Gene3D Transferase(Phosphotransferase) domain 1 493 684 - -
Ahy1g1420 686 ProSiteProfiles Protein kinase domain profile. 413 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1420 Ahy-Chr1 49532303 49536830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1420 6 526 Miscellaneous Gene Families AT4G22730 58.271 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Ahy1g1420 PK_Tyr_Ser-Thr 5.50E-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1420 - - gmx:100784155 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1455 11 61151327 61155348 Ahy1g1420 1 49532303 49536830 hybridization