Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1419 ATGGTGGAGGAAATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAATGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGATGATGTTGTTAGTGATAATCAAGGTAGAATCATTAGCAGGCAACTTATTTACAACAAAGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCAGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCACATCTGAAGGGTGGATATTATCATGCTGGCTTCACACGCAAAGATTTATACAACCACATTGATCGTTATCGTCAGTCAAAAGTTAAAAACGGGGATGCCAATGAGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTCGAGCCTATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAAGAAGCCTTTGGTCATTTTCTCCGGACGCAATCATCACAGGCAGACTGTTATCTTCGACTCCGGCCTACTATCCGACGAAACCACAGAGATGTATAAGTGGTTGTTGGAATCCTTTGTTGAAGCGATGGGTGGGAAAAGTCCTAAAGTAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCGGTTTTGCGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGTGATTTTAAGGGTCTTATATACGACAACAATGACCACAGAGACTTTGATCGGAGATTGGCAGCCATTTTGGATAAGCACAACCTTATTAGGAGTACTTGGATGGAAAAGACGTACGAAACTGGTGCGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGCAAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGGATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAATGAATTAATAGTTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATAACCTCGTTAGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTTGTAATGAGATTCAGAGTGCGGGCGCTTTGAATATTAAGGTACTGAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACAGGTAGAAGTCGATAGAGGTAAGAAACTGCTCTTGTGCTCGTGCAAGCTGTTTGAATCATGTGGTATTCCCTGTAGTCATGTCTTTTGTGCCATGAAGTTTGAAAACATACTTGAGTTTCCAGATTCATTGATCTACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGAAATGCCTGTGAACGATGACGTCGAAAGGGTCTTAAATTTTCGAGTCGGTGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTACAGACTTTGATGAAATACAGTCTGAACTTGTCAATTTAGTTATCTTCCTGCAGTCATGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCCTTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGCACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGAAAGGTAACCCTCGCAATCGATCAGACGGCAATGCATCAGCCAAGGACTTAGATTTTAGTCCAGAAAGGTTTGCTAATTCTTCGAGTTCATTCTCAATTAAGTTCGAACACCACTCAGGACCTAAGACCAAGCCTTTTAAAAAGGGTGGAATAAGGAAGTTTACAGTGACGGGTATGAGGAACCCGAAGGGTAAAGACAACACTTTTGATGAGGTGAAGGAGTCACAGCAGGACAAGGGACATTCATTCACAAACTATAAATGCGTTAATGATGTCATGGATGAGAAATGTGACACACCACATGTGCAGATCGATGTCCGAGATCCGTTACCATCGTCAATGCCTTGTGGCAACAAACAAGGATCGTACATAGCATTATTCGCGTCGATGCATAGGACACTTTGA 2340 0.4256 MVEEIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVSDNQGRIISRQLIYNKEGWRNMRYLDLDDRSREARSLTRTKCPAQLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLKGGYYHAGFTRKDLYNHIDRYRQSKVKNGDANEAINYLIGKSNNDPLFFGKYTFTSDERLEPIFWADGQSIIDYHCFGDIVAFDSTYKKNKYKKPLVIFSGRNHHRQTVIFDSGLLSDETTEMYKWLLESFVEAMGGKSPKVVITDGDLAMRDAIKNVLPDATHRFCGWHLQRNACENIKNPNFLRDFKGLIYDNNDHRDFDRRLAAILDKHNLIRSTWMEKTYETGAMWSHCFLRDKFFGYIRTTSQCKGINSLIRFYVNRKNTLIDFMDNLDRALKEYRNNELIVDFKSQCSEPVMITSLEVYERSASCYFTRNIFKEICNEIQSAGALNIKVLSTTLDKVEFSVTALGDPAKDRQVEVDRGKKLLLCSCKLFESCGIPCSHVFCAMKFENILEFPDSLIYKRWTKNAKNEFISTEMPVNDDVERVLNFRVGALASNCNKLCDIACKDLTDFDEIQSELVNLVIFLQSCKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHKHGHYYKRCPDLMQHSVKGNPRNRSDGNASAKDLDFSPERFANSSSSFSIKFEHHSGPKTKPFKKGGIRKFTVTGMRNPKGKDNTFDEVKESQQDKGHSFTNYKCVNDVMDEKCDTPHVQIDVRDPLPSSMPCGNKQGSYIALFASMHRTL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1419 779 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 120 629 IPR031052 GO:0006355
Ahy1g1419 779 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 111 IPR031052 GO:0006355
Ahy1g1419 779 ProSiteProfiles Zinc finger CCHC-type profile. 624 639 IPR001878 GO:0003676|GO:0008270
Ahy1g1419 779 PANTHER OS02G0262500 PROTEIN 120 629 - -
Ahy1g1419 779 PANTHER OS02G0262500 PROTEIN 5 111 - -
Ahy1g1419 779 Pfam FAR1 DNA-binding domain 18 108 IPR004330 -
Ahy1g1419 779 MobiDBLite consensus disorder prediction 645 666 - -
Ahy1g1419 779 SUPERFAMILY Retrovirus zinc finger-like domains 610 642 IPR036875 GO:0003676|GO:0008270
Ahy1g1419 779 MobiDBLite consensus disorder prediction 678 721 - -
Ahy1g1419 779 Pfam MULE transposase domain 195 289 IPR018289 -
Ahy1g1419 779 ProSiteProfiles Zinc finger SWIM-type profile. 472 508 IPR007527 GO:0008270
Ahy1g1419 779 SMART 26again6 483 510 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1419 Ahy-Chr1 49297756 49300588 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g1419 MULE 9.60E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1419 - - ahf:112723022 1629.77