Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy1g1370 | ATGGCAGCGGAGTCAGTGAGGGTGGCGTCGTCTCTCTGCAATCTGAATGGGTCGCAGAGGAGACCGGCCATGTTGAGTCCGGTTCGGTACATGGGTGCTCGACCAAAACCCTATAACGCTTCCGCTACTTCATCTTCTCTCTCTCACTTCTTTGGGAGTTCCAGAATCAAAATCAATTCTTCTAAGCTCTACCATTTGCACCCCAAGACTCCAAGAAACTTGTCAGTTTTGGCTATGTCCGCTGATGAGACAAAGCGTGCTGTTCCGTTAAGGGATTATCGCAATATTGGTATCATGGCTCACATTGATGCTGGCAAGACAACCACGACTGAACGAATTCTCTACTACACTGGGAGAAACTACAAGATTGGAGAGGTGCACGAGGGAACAGCTACAATGGACTGGATGGAACAGGAACAAGAAAGAGGGATTACTATTACTTCTGCTGCAACCACCACATTCTGGAATAACCATAGGATCAACATTATTGACACTCCTGGTCATGTTGACTTCACCTTAGAAGTGGAGCGTGCCCTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGTGTGGAACCACAATCAGAAACGGTGTGGAGGCAGGCTGATAAATATGGGGTCCCACGAATTTGTTTTGTAAATAAGATGGATCGTCTTGGAGCCAATTTCTTCCGAACAAGAGACATGATTGTAACAAACTTGGGTGCCAAACCACTTGTAATTCAGTTACCAATTGGCTCAGAAGATAGCTTTAAGGGAGTTGTTGATCTGGTAAGGATGAAAGCTATAGTTTGGTCTGGAGAAGAGTTGGGTGCCAAGTTTGACTATGTAGATATTCCAGAAGATCTTCAAGAGTTGGCTCAGGATTACCGATCCCAGATGATAGAAACCATAGTTGAGCTGGATGATCAGGCTATGGAGAATTACCTGGAAGGAGTTGAACCAGATGAAGAAACTATAAAAAAACTAATCAGGAAGGGAACCATTGCAGCAAGTTTCGTGCCGGTGATGTGTGGCTCAGCTTTCAAAAACAAAGGGGTCCAACCTTTACTTGATGCTGTGGTGGATTATCTACCTTCCCCAATTGATTTGCCACCAATGAAGGGCAGTGATCCTGAAAACCCTGAAGTGACAATAGACAGGAAAGCAGATGACGATGAACCATTTTCTGGACTAGCTTTTAAGATCATGAGTGATCCATTTGTAGGTTCCCTCACGTTCGTCAGGGTGTATTCTGGAAAGCTTACTGCGGGCTCTTATGTACTCAATGCAAACAAGGGGAAAAAAGAGAGAATTGGCAGGCTTCTAGAAATGCATGCAAACAGCAGAGAGGATGTTAAAGTAGCTTTGACAGGTGATATTATTGCTCTTGCAGGTTTAAAAGATACTATTACAGGTGAAACGTTGTCTGACCCGGAGAATCCGGTTGTGCTTGAGCGGATGGACTTCCCCGACCCTGTTATAAAGGTTGCAATTGAACCCAAAACTAAAGCTGATGTTGACAGGATGGCTGCTGGTTTAATCAAACTTGCACAGGAAGACCCTTCTTTCCACTTCTCTAGGGACGAAGAGATTAACCAGACAGTAATTGAAGGAATGGGAGAATTACATCTCGAAATCATTGTTGATCGACTCAAAAGAGAATTTAAGGTTGAAGCCAATGTTGGTGCTCCCCAAGTGAACTATAGGGAAAGCATTTCCAAAGTCTCGGAAGTAAAGTATGTACACAAGAAACAGTCAGGTGGACAGGGTCAGTTTGCAGATATCACAGTTCGGTTTGAACCCATGGACCCAGGGAGTGGATATGAATTCAAGAGTGAAATAAAGGGAGGTGCTGTACCGAAAGAGTACATTCCAGGGGTCATCAAAGGATTGGAAGAGTGCATGAGCAATGGTGTTCTTGCTGGCTTCCCTGTTGTTGATGTACGTGCAGTGCTTGTGGATGGTTCTTACCACGATGTAGATTCAAGTGTGCTGGCATTCCAGCTTGCAGCAAGAGGAGCCTTCCGGGAAGGAATGAGGAAAGCCGGGCCAAGGATGCTTGAACCTATAATGAAAGTAGAAGTTGTTACTCCTGAAGAACATTTGGGTGATGTAATTGGTGATCTCAACTCAAGAAGAGGTCAGATCAACAGCTTTGGTGACAAACCAGGTGGCCTTAAGATTGTGGATGCTCTGGTTCCTCTTGCTGAGATGTTTCAATACGTGAGCACACTCAGAGGAATGACAAAGGGACGTGCTTCCTACACAATGCAATTAGCCATGTTCGACGTGGTTCCACAGCACATTCAGAACCAACTTGCCACAAAGGAGCAAGAAGTTGCCGCTTAG | 2343 | 0.4503 | MAAESVRVASSLCNLNGSQRRPAMLSPVRYMGARPKPYNASATSSSLSHFFGSSRIKINSSKLYHLHPKTPRNLSVLAMSADETKRAVPLRDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWNNHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVIQLPIGSEDSFKGVVDLVRMKAIVWSGEELGAKFDYVDIPEDLQELAQDYRSQMIETIVELDDQAMENYLEGVEPDEETIKKLIRKGTIAASFVPVMCGSAFKNKGVQPLLDAVVDYLPSPIDLPPMKGSDPENPEVTIDRKADDDEPFSGLAFKIMSDPFVGSLTFVRVYSGKLTAGSYVLNANKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKDTITGETLSDPENPVVLERMDFPDPVIKVAIEPKTKADVDRMAAGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKVSEVKYVHKKQSGGQGQFADITVRFEPMDPGSGYEFKSEIKGGAVPKEYIPGVIKGLEECMSNGVLAGFPVVDVRAVLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKIVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQLATKEQEVAA* | 781 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy1g1370 | 780 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 90 | 364 | IPR027417 | - | |
Ahy1g1370 | 780 | Pfam | Elongation factor Tu domain 2 | 407 | 473 | IPR004161 | GO:0005525 | |
Ahy1g1370 | 780 | CDD | EF-G | 95 | 365 | - | - | |
Ahy1g1370 | 780 | PANTHER | TRANSLATION ELONGATION FACTOR G-RELATED | 78 | 773 | - | - | |
Ahy1g1370 | 780 | Gene3D | - | 568 | 771 | IPR014721 | - | |
Ahy1g1370 | 780 | PANTHER | RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL | 78 | 773 | - | - | |
Ahy1g1370 | 780 | Hamap | Elongation factor G [fusA]. | 89 | 775 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Ahy1g1370 | 780 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 490 | 567 | - | - | |
Ahy1g1370 | 780 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 134 | 149 | IPR031157 | - | |
Ahy1g1370 | 780 | TIGRFAM | small_GTP: small GTP-binding protein domain | 93 | 263 | IPR005225 | GO:0005525 | |
Ahy1g1370 | 780 | Gene3D | Translation factors | 375 | 489 | - | - | |
Ahy1g1370 | 780 | Hamap | Elongation factor G, chloroplastic. | 83 | 780 | IPR030848 | GO:0003746|GO:0006414|GO:0009507 | |
Ahy1g1370 | 780 | SUPERFAMILY | EF-G C-terminal domain-like | 487 | 564 | IPR035647 | - | |
Ahy1g1370 | 780 | SMART | EFG_C_a | 683 | 771 | IPR000640 | - | |
Ahy1g1370 | 780 | Pfam | Elongation factor G C-terminus | 684 | 770 | IPR000640 | - | |
Ahy1g1370 | 780 | Pfam | Elongation factor Tu GTP binding domain | 92 | 364 | IPR000795 | GO:0003924|GO:0005525 | |
Ahy1g1370 | 780 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 562 | 682 | IPR020568 | - | |
Ahy1g1370 | 780 | CDD | EFG_mtEFG1_IV | 566 | 681 | IPR005517 | GO:0005525 | |
Ahy1g1370 | 780 | CDD | EFG_III | 488 | 563 | IPR009022 | - | |
Ahy1g1370 | 780 | Pfam | Elongation factor G, domain IV | 562 | 680 | IPR005517 | GO:0005525 | |
Ahy1g1370 | 780 | TIGRFAM | EF-G: translation elongation factor G | 86 | 775 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Ahy1g1370 | 780 | CDD | EFG_mtEFG_C | 686 | 764 | IPR035649 | - | |
Ahy1g1370 | 780 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 91 | 366 | IPR000795 | GO:0003924|GO:0005525 | |
Ahy1g1370 | 780 | SUPERFAMILY | Translation proteins | 347 | 487 | IPR009000 | - | |
Ahy1g1370 | 780 | CDD | EFG_mtEFG_II | 393 | 475 | - | - | |
Ahy1g1370 | 780 | Gene3D | - | 84 | 374 | IPR027417 | - | |
Ahy1g1370 | 780 | Gene3D | - | 687 | 758 | - | - | |
Ahy1g1370 | 780 | PRINTS | GTP-binding elongation factor signature | 141 | 149 | IPR000795 | GO:0003924|GO:0005525 | |
Ahy1g1370 | 780 | PRINTS | GTP-binding elongation factor signature | 161 | 171 | IPR000795 | GO:0003924|GO:0005525 | |
Ahy1g1370 | 780 | PRINTS | GTP-binding elongation factor signature | 95 | 108 | IPR000795 | GO:0003924|GO:0005525 | |
Ahy1g1370 | 780 | PRINTS | GTP-binding elongation factor signature | 177 | 188 | IPR000795 | GO:0003924|GO:0005525 | |
Ahy1g1370 | 780 | PRINTS | GTP-binding elongation factor signature | 213 | 222 | IPR000795 | GO:0003924|GO:0005525 | |
Ahy1g1370 | 780 | Pfam | Elongation Factor G, domain III | 487 | 560 | IPR041095 | - | |
Ahy1g1370 | 780 | SUPERFAMILY | EF-G C-terminal domain-like | 686 | 775 | IPR035647 | - | |
Ahy1g1370 | 780 | SMART | EFG_IV_2 | 563 | 681 | IPR005517 | GO:0005525 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy1g1370 | Ahy-Chr1 | 44791228 | 44795159 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy1g1370 | 76 | 751 | Eukaryotic Initiation Factors Gene Family | AT1G56070 | 25.091 | 1.87e-42 | 164 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy1g1370 | K02355 | - | gmx:102663021 | 1404.04 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g1398 | 11 | 53837654 | 53841541 | Ahy1g1370 | 1 | 44791228 | 44795159 | hybridization |