Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1366 ATGGTGGCAACTATGGCTGAGGATGGCGGAGGTGGGCGGTGGTGGCTGTTCCTCCATTCCGGCGTAGCAGTTGAGCGAAGATGGAAGAGGAAGACGTCGATAAGAAAGTCAGAAAGGCAGCTTGTAGGCATGAACCCCAAGCATGTGATGTTGAAATGGGTGCGTCGTCTTGGGCCTGGAAGCTCTTTAAAGAACAGGTATGTTGCATTGGGCCTAAGCCCAATAGAGGTAGTACCGAAGGGACATATGGCAATTTATGTTGGAGAATGGGAGGGAGAGAAGCAACGAGTTTTGGTGCCCGTTACACACTTGAACCACCCTTTGCTTGGGAAGCTTCTAGAGAAGGCAGAGAAAGTGTATGGGTTTGATCATCCAGGTGTAATAACCATACCTTGTGGAATATCAGAGTTCCAGAAAGTTCAGCAGAATATTTACTCGGCACAACGACTCCAAAGGCGACGCCAAATATGTTGCTCTATCTATATCTATAATACCAAATACTAA 504 0.4722 MVATMAEDGGGGRWWLFLHSGVAVERRWKRKTSIRKSERQLVGMNPKHVMLKWVRRLGPGSSLKNRYVALGLSPIEVVPKGHMAIYVGEWEGEKQRVLVPVTHLNHPLLGKLLEKAEKVYGFDHPGVITIPCGISEFQKVQQNIYSAQRLQRRRQICCSIYIYNTKY* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1366 167 PANTHER - 22 160 - -
Ahy1g1366 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 160 IPR003676 GO:0009733
Ahy1g1366 167 Pfam Auxin responsive protein 75 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1366 Ahy-Chr1 44543081 44544971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1366 74 138 Calmodulin-binding Proteins AT3G43120 49.231 1.35e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1366 K14488 - gmx:102668727 152.14