Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1365 ATGAACACCTTCTCCCACGTACCTCCAGGCTTTCGTTTTCATCCGACTGATGAAGAATTAGTTGACTACTACCTTAGGAAAAAGGTAGCATCCAAAAAGATTGATCTAGATGTCATCAAAGACGTTGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAACTATGCAAAATAGGAAGCGATGAAGAAAATGACTGGTATTTCTTCAGTCATAAAGATAAGAAGTACCCAACAGGAACAAGAACGAATAGGGCAACAAAAGCAGGGTTTTGGAAAGCCACGGGAAGAGATAAAGCAATATACTCAAAGCAGCATTGCCTTATTGGAATGAGAAAGACTCTTGTCTTCTACAAAGGAAGAGCTCCTAATGGCCACAAGTCTGATTGGATCATGCATGAGTATCGCCTTGAAACCAATGAAAATGGAACTGCTCCGGAAGAAGGGTGGGTTGTATGTAGAGTGTTCAAGAAGAAAATGGCAACAGTGAGGAAAATTGGAGACTATGATTCACCATGTTCTTGGTACGATGAACAAGTTCCCTTCATGCAAGATCTTGAATCTTCATCCCCAATAAAGCCACCAATAATTAACAACAACCATTATGCTTCTTCATACAACCATCACCAGTTACAATTACCCTGCAAACCGGAATTCCATCAACCAATGCAATACAACAACATGAACATGCCACGTCACGACGACGCTGCTGATAATAACAACAACTTCCTCCAACTTCCTCAGCTTGAAAGCCCTAATGCTGGAATTAGCCCCTTCTTGCAACAACAAGATCCTCATCAGCTATTGCAACAACAAAATTCCAACAACAGCAATTATCATCTTGATCAAGTAACCGATTGGCGAGTTCTCGATAAATTCGTTGCGTCGCAGCTCATGAGTCATGGTGATGATGATGGCCACAACCACAATAATAATGTTTCCAAAGAAGTAATAAACAGTTATTCTGATGCTTCAATTCTCCATGTGGCTCAACAGATTGCTATGCTGGCAAATGGATCGTCATCTTCATCATCATCAAGGAGGCCTCAAATTTCTCATCAGGAATATGCTGCTTCAACTTCCACATCAAGTTCTCAGATTGATCTCTGGAAGTCATCATCATGA 1122 0.4073 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEENDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQHCLIGMRKTLVFYKGRAPNGHKSDWIMHEYRLETNENGTAPEEGWVVCRVFKKKMATVRKIGDYDSPCSWYDEQVPFMQDLESSSPIKPPIINNNHYASSYNHHQLQLPCKPEFHQPMQYNNMNMPRHDDAADNNNNFLQLPQLESPNAGISPFLQQQDPHQLLQQQNSNNSNYHLDQVTDWRVLDKFVASQLMSHGDDDGHNHNNNVSKEVINSYSDASILHVAQQIAMLANGSSSSSSSRRPQISHQEYAASTSTSSSQIDLWKSSS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1365 373 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Ahy1g1365 373 MobiDBLite consensus disorder prediction 338 373 - -
Ahy1g1365 373 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Ahy1g1365 373 MobiDBLite consensus disorder prediction 228 247 - -
Ahy1g1365 373 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 329 - -
Ahy1g1365 373 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 329 - -
Ahy1g1365 373 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Ahy1g1365 373 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1365 Ahy-Chr1 44477831 44483507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1365 1 368 NAC Transcription Factor Family AT1G62700 55.392 1.38e-130 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy1g1365 NAM 3.40E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1365 - - aip:107606832 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1392 11 53546892 53552193 Ahy1g1365 1 44477831 44483507 hybridization
Ahy5g0954 5 13980710 13983527 Ahy1g1365 1 44477831 44483507 PCT
Ahy1g1365 1 44477831 44483507 Ahy5g0954 5 13980710 13983527 PCT