Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1358 ATGGCGGTTCAAACCGCCATAATCACCAGAACTGCCAAAATAAACAAAGCCAATTACGGCAGTAACAAAAGTTGCCAAAATGTTGTGGGAACCCTATTTACTCATCATCAGAAATGTGTGCTTGTTGACACACAAGGTGCAGGGAATAATCGAAAAATATCTGCTTTTATTGGTGGTTTGGATCTCTGTGATGGCAGATATGACACACATCAGCATAGGCTATTTTGCAATTTAGAAATCGTTTACAAAGAGGATTTTCATAATCCTACATTTCAAGTAGGTTCTAGTGGAGGTGGACCAAGAGAGCCATGGCATGGCATGATTTGCAAGGTTAAAGGGCTAGCAGCTTATGATATATTAATCAATTTCGAACAAAGATGGAGAAAAGTAAAAAAATGGCGAGACTTTAGACTCAACAAGGTCAAAAATTGGCACGACAATGCATTACTAAGGCTAGACCAGATATCATGGATAGTCAGTCCATCTTCGAGTTTTGGTGATGATAAAACTATCCAGGTGACCGACGAAAATGATCCTGAAACTTGGAATGTGCAGGTATTTTGGTCCATAGATTCAGGATCAGTGAAGGGTTTTCCAAAGATTTCGACAAGGCTCAATCTCAGGTGA 627 0.3971 MAVQTAIITRTAKINKANYGSNKSCQNVVGTLFTHHQKCVLVDTQGAGNNRKISAFIGGLDLCDGRYDTHQHRLFCNLEIVYKEDFHNPTFQVGSSGGGPREPWHGMICKVKGLAAYDILINFEQRWRKVKKWRDFRLNKVKNWHDNALLRLDQISWIVSPSSSFGDDKTIQVTDENDPETWNVQVFWSIDSGSVKGFPKISTRLNLR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1358 208 Gene3D Endonuclease Chain A 6 152 - -
Ahy1g1358 208 PANTHER PHOSPHOLIPASE D 18 202 IPR015679 -
Ahy1g1358 208 PANTHER PHOSPHOLIPASE D 18 202 - -
Ahy1g1358 208 Pfam Phospholipase D Active site motif 32 66 IPR001736 GO:0003824
Ahy1g1358 208 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 31 66 IPR001736 GO:0003824
Ahy1g1358 208 SUPERFAMILY Phospholipase D/nuclease 30 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1358 Ahy-Chr1 43675626 43689398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1358 26 200 Phospholipase D Gene Family (Wang group) AT4G35790 60.215 1.43e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1358 K01115 - ahf:112720191 440.654