Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1343 ATGGAAAAATGCAGTGTACCTGAGCTATCAGTATTTCAGTCAAAAGATTACTGCTTTGAGAGCAAAGTGATTAGGAGAATGGAGATTTTGGTGCTAACCACATTGGATTGGAATATGAGCATTATAACCCCCTATGATTTCCTTCCTTATTTCATTACAAAGTTTTGCAATCAACCCCCAGAAACTACCATTTTTTCCAAGACCATGCAACTCATCTTCACCACAATCAAAGAGGTGGGCATAATGGATCACAAACCATCTGTTGTTGCAGCTGCAGCTACTTTGGTGTCATCGGATCAGCAACTAACCATAGAAGTTGTAGAGTTGAAGATTAGTTCAATTCCTCAACATAGGTTTCTTGATCTTAAAGATGTATTTTCCTGCTACAATCTAATTTAA 399 0.3759 MEKCSVPELSVFQSKDYCFESKVIRRMEILVLTTLDWNMSIITPYDFLPYFITKFCNQPPETTIFSKTMQLIFTTIKEVGIMDHKPSVVAAAATLVSSDQQLTIEVVELKISSIPQHRFLDLKDVFSCYNLI* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1343 132 SUPERFAMILY Cyclin-like 24 114 IPR036915 -
Ahy1g1343 132 PANTHER CYCLINS 1 131 IPR039361 -
Ahy1g1343 132 Gene3D - 41 99 - -
Ahy1g1343 132 Gene3D - 12 40 - -
Ahy1g1343 132 Pfam Cyclin, C-terminal domain 42 131 IPR004367 -
Ahy1g1343 132 PANTHER CYCLIN-D5-1 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1343 Ahy-Chr1 41136655 41139141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1343 1 100 Core Cell Cycle Gene Families AT5G65420 38.462 1.07e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1343 K18811 - ahf:112802995 258.84