Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1304 ATGCTCTCTGAAACGAAGAAGCCTACGAAGAAGAGTGGGAGGCACATTCTGAAACTTGCCTCGTTTCTTATTAAACGCACTCTCTCCAATGTAAAACGCATGCAGGGTGAAAGATTGATGGAAGAAGTAGCAATCATTGGAGGGTTGATTGGTGTGCAGTTTATGGCGGCAGGGAACGCTGTTTTGATGAGCTTTGTTATGTCTTTGGGACTCAAATCTCTCACCATTGTTACATTCATGTCCCCTGCTACATCTCTTTTGCTCTCCCCTCTTGCCTTCTACTCTGAAAGGAGCCTGTGGCCCAAGAAATTCAGTTCCAAGTTGATTTTGCGGTTGATCTTGCTTTCCTTGGGAGGGACAACATTCCAGGTTTTGATGCTGAAAGGAATGAATCTAACCTCACCAGCAATGGGGACTGCCATGCCAAATGTTGCCCCTGGACTTATCTTCATCATTGCTTGGATCTTTCGCAGGTTGGAAAAAGTGAACATAAAATCGACATATAGTAGAGTAAAAATCATGGGGACAATGCTTTGTGTGGTAGGGGCTTTTGCAATGAGCATAATGCAAAGCATGTCCACCAACGCAGCCAAAGAAGATGCAACATTAGTTCATTATATATCAGATCCAACAGCAGGTGATGTCTTTGACAAACAGAAGATATTGGGTTGCATCTATCTTCTACTCGCAATCTCTTTATTGTCAAGTTCCCTAGTCTTGCAGGCTTTTATTTTTAGAGATTTTCCGGCACCCATATCGATGTGCGTGATCACATCCTTTTTGGGCACGTTCATAACAGCAGCATTTCAATTCATTGAAGATCACGAAATCAAAACTGGTTTGGACGTTTTTAGTGCCCGAAACCTCATCATGTATTTTCTTCTGGAAGGTGCAGTAAATGGAGTGTGCATAAGCTTCAGTAGTTGGGCAATAAAGAAGAAAGGACCAGTTTTGGTGTCCATGTTCAGCCCCATTGGCACCGTTTGCTCTGCCATTTTCTCTGTTGTTACCATAGGAGTCACCATCAGTGTTGGAAGCTACGGGGGAATGTTTATAATGTTCACTGGGCTTTACTTTTTCCTTTGGGCTAAAGGAAAAGAAGAAGACATCGAAGGCAGTGGTGGCAAACAAGGTGAACATGATATTGAGAAGCCTCTCTTAGAATGA 1167 0.4302 MLSETKKPTKKSGRHILKLASFLIKRTLSNVKRMQGERLMEEVAIIGGLIGVQFMAAGNAVLMSFVMSLGLKSLTIVTFMSPATSLLLSPLAFYSERSLWPKKFSSKLILRLILLSLGGTTFQVLMLKGMNLTSPAMGTAMPNVAPGLIFIIAWIFRRLEKVNIKSTYSRVKIMGTMLCVVGAFAMSIMQSMSTNAAKEDATLVHYISDPTAGDVFDKQKILGCIYLLLAISLLSSSLVLQAFIFRDFPAPISMCVITSFLGTFITAAFQFIEDHEIKTGLDVFSARNLIMYFLLEGAVNGVCISFSSWAIKKKGPVLVSMFSPIGTVCSAIFSVVTIGVTISVGSYGGMFIMFTGLYFFLWAKGKEEDIEGSGGKQGEHDIEKPLLE* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1304 388 PANTHER OS11G0588100 PROTEIN 42 387 - -
Ahy1g1304 388 Pfam EamA-like transporter family 222 361 IPR000620 GO:0016020|GO:0016021
Ahy1g1304 388 Pfam EamA-like transporter family 49 187 IPR000620 GO:0016020|GO:0016021
Ahy1g1304 388 PANTHER WAT1-RELATED PROTEIN 42 387 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1304 Ahy-Chr1 38612059 38620170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1304 8 367 Nodulin-like Gene Family AT5G47470 49.725 1.96e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1304 - - gmx:100809182 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1327 11 46767456 46777588 Ahy1g1304 1 38612059 38620170 hybridization
Ahy5g1624 5 42506438 42509460 Ahy1g1304 1 38612059 38620170 PCT
Ahy1g1304 1 38612059 38620170 Ahy5g1624 5 42506438 42509460 PCT