Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1272 ATGGCGAACCAAGCTGAAATCTCAGCCCTTAACCGCATCAAGCTGCATCTCTTGGGTGAACTCTCACCGCTCGGAACACCAGAGTTCACTAAAAGCAAACTCTGGCTTCAAATAGACGAACCCTCCACAGACCCTAATTTCTCTTTTCATCAATCAGAATGCCAATCTCAATCTCAGTCTGAATTTTCCCCTACCGACTCCTCAATTTCTCTCAACCACTACTTCACCGATCTTCCCCTCTTTGAATTCGATTCAAAACCTCAAGTGATCGACCTTGAATCCGACCTCGAAGCACCCAAAACCCTGCCTCAAAGTAATCCCCAAATCGAGATGAACAAGGCTCATCGCCTCAACCGGAAACCGTCGCTGCAAATCTCGCTCCCGAAGAAGAAAACCGAATGGATTCAGTTCGGAAACCCGGATCCGAAACCCGAGGCTGTGGAACCGTTCGTTCAGCAGCAGCAGCAGCAAAAACAACAACCGGAGCCAGAGAAGAAGCACTACAGAGGCGTTCGCCAAAGGCCGTGGGGAAAATTCGCCGCGGAAATTCGTGACCCGAACAAACGAGGGTCCAGAGTGTGGCTTGGAACCTTCGACACCGCCATCGAAGCCGCCAAGGCCTACGACCGCGCTGCCTTCAAGCTCCGAGGATCCAAGGCGATCTTGAACTTCCCTCTCGAGGTTGAATCCATGACCACCTCTGCTTCTGCTTCCACCTCCGGCGATGGCGGTGATAGGAAGCGCCGCCGCGAAGAAGAGGAAGTGGCGCCGATGACGAAGGCGGTGGAGGAAGAAGTTGTTGAGGTGGTTATGCCGGTGGTGAAGAAGGAGAAGACGACTTTTGAATCGGAGGTTAACTGTATAAGGGAGCTTCCGTTAACGCCGTCCATTTGGACGGGGTTCTGGGACAGTGATGTGAAGGGAACAGGAATGGGAATATTTAGCGTGCCGCCGTTGTCACCGTTATCTTCTCCCCTTGCTGTTATGGTTGTGTGA 996 0.5231 MANQAEISALNRIKLHLLGELSPLGTPEFTKSKLWLQIDEPSTDPNFSFHQSECQSQSQSEFSPTDSSISLNHYFTDLPLFEFDSKPQVIDLESDLEAPKTLPQSNPQIEMNKAHRLNRKPSLQISLPKKKTEWIQFGNPDPKPEAVEPFVQQQQQQKQQPEPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEVESMTTSASASTSGDGGDRKRRREEEEVAPMTKAVEEEVVEVVMPVVKKEKTTFESEVNCIRELPLTPSIWTGFWDSDVKGTGMGIFSVPPLSPLSSPLAVMVV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1272 331 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 316 - -
Ahy1g1272 331 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 3 316 - -
Ahy1g1272 331 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
Ahy1g1272 331 PRINTS Ethylene responsive element binding protein signature 168 179 IPR001471 GO:0003700|GO:0006355
Ahy1g1272 331 MobiDBLite consensus disorder prediction 231 257 - -
Ahy1g1272 331 Pfam AP2 domain 167 217 IPR001471 GO:0003700|GO:0006355
Ahy1g1272 331 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Ahy1g1272 331 MobiDBLite consensus disorder prediction 242 257 - -
Ahy1g1272 331 MobiDBLite consensus disorder prediction 136 171 - -
Ahy1g1272 331 CDD AP2 167 225 IPR001471 GO:0003700|GO:0006355
Ahy1g1272 331 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Ahy1g1272 331 MobiDBLite consensus disorder prediction 46 65 - -
Ahy1g1272 331 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Ahy1g1272 331 SUPERFAMILY DNA-binding domain 167 227 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1272 Ahy-Chr1 37159496 37160778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1272 1 323 AP2-EREBP Transcription Factor Family AT5G47230 43.582 7.02e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy1g1272 AP2 4.30E-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1272 K09286 - gmx:100816039 311.997