Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1260 ATGGTACCCGTGATGGTTATGGGACTCCAAGTTAAATGTAAAGTACCAAAATTATGCAATGTCAACGGGGTAACAGTGGTGGCAACAGATTATGGTCAGGGAGACAGAACAGACTTCATATTGAGCCCACGGGCCTTTAATAGTTTGGGTGTGAGCCCTGATGCATCTAAAGAGCTAAAAAAATACGGTACTCTTGATATTGCATACAAAAGAGTCCCTTGCACATACCCTGGCCGCAACATTGTTGTTAAGGTTCAAGAAAGTAGCAGCAACCCTGGATACTTTGCTGTGGTTCTTCAAAACCTTGGTGGATCATACGATGTCACTAATGTTGAATTGTGGGAGGATTCACGCAAACAATGGAGTCCATTGCGTAGGGTTTATGGGGCAGTGTTTGACTATGCTAACCCACCAAAGGGTCAACTCTTCTTGAGGTTCCAAGTGATTGGTTGTTATGGAACTTATTGGCAAATACCAAAGAAACCTATCCCTGCTGATTGGAAGCCCAAAATGACTTATGACACTGGACTTCAGCTTAAATAA 543 0.4291 MVPVMVMGLQVKCKVPKLCNVNGVTVVATDYGQGDRTDFILSPRAFNSLGVSPDASKELKKYGTLDIAYKRVPCTYPGRNIVVKVQESSSNPGYFAVVLQNLGGSYDVTNVELWEDSRKQWSPLRRVYGAVFDYANPPKGQLFLRFQVIGCYGTYWQIPKKPIPADWKPKMTYDTGLQLK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1260 180 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 9 79 IPR007112 -
Ahy1g1260 180 SUPERFAMILY PHL pollen allergen 79 174 IPR036749 -
Ahy1g1260 180 Gene3D - 8 75 IPR036908 -
Ahy1g1260 180 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 93 175 IPR007117 -
Ahy1g1260 180 Gene3D - 76 180 IPR036749 -
Ahy1g1260 180 PANTHER EXPANSIN-B1-LIKE PROTEIN 9 179 - -
Ahy1g1260 180 Pfam Expansin C-terminal domain 81 151 IPR007117 -
Ahy1g1260 180 SUPERFAMILY Barwin-like endoglucanases 9 78 IPR036908 -
Ahy1g1260 180 PANTHER EXPANSIN-B3 9 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1260 Ahy-Chr1 36079757 36082139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1260 10 179 Expansin Gene Family AT4G17030 45.882 5.96e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1260 - - ahf:112802200 378.252