Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy1g1259 | ATGGAGCTTAATTTGAAGCGCCAGATCGGAATTTTTTGTGTTCTATTGATCTTACCAGCACTATGCAGTGCTGCGTTTACAAAATCCAGAGCAACATTTTATAGTACCTCTGATGGTTTAGGGACTCCAACTGGACGCTGTGGGTACGGCGACTATGGAAGGACGGTCCACGGAGGAAGTGTCGCCGGTGTGTCAAACCTCTGGAGGGATGGAGTTGGCTGTGGTCTTTGTTATCAGGTGAGGTGCACAAACCCATCGCTGTGCAACAGTAATGGAGCATACTTGGTGGTAACAGACTACGGTGCAGGAGATAGAACAGATTTCATAATGAGCCCAGCGGCCTTCTCAAGTTTGGGAGTCAACTCAACAGCAAATGATGAACTCAGGAAACTAGGCACCGTTGATATTGAATACCAGAGGATTTCATGCAGTTACCCTGGCCAAAACATTGTCATCAAAATCAAAGAGAGTAGCACCAACCCTGGTTACTTGTCTATTGTACTTTTCAATGTTGGTGGAACATGCGATGTCATTGCTATTCAGTTGTCGCAGTCGGGCAGCAACACATGGGTTTCTTTGCAGAGGGTGGACGGTGCAGTTTTTCAGATTTCAAACCCGCCAAGTGGGACCCACAGATTCAGATTCCAAGTTAATTGCGGTTCTGGACTTGAATGGAGGCTCCCCAAGAATGACATCCCTGCTAACTGGAGGGCTGGTGCCACTTATGACACTGGCATTCAGTTTTAA | 747 | 0.4699 | MELNLKRQIGIFCVLLILPALCSAAFTKSRATFYSTSDGLGTPTGRCGYGDYGRTVHGGSVAGVSNLWRDGVGCGLCYQVRCTNPSLCNSNGAYLVVTDYGAGDRTDFIMSPAAFSSLGVNSTANDELRKLGTVDIEYQRISCSYPGQNIVIKIKESSTNPGYLSIVLFNVGGTCDVIAIQLSQSGSNTWVSLQRVDGAVFQISNPPSGTHRFRFQVNCGSGLEWRLPKNDIPANWRAGATYDTGIQF* | 249 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy1g1259 | 248 | Pfam | Lytic transglycolase | 61 | 138 | IPR009009 | - | |
Ahy1g1259 | 248 | SUPERFAMILY | Barwin-like endoglucanases | 12 | 147 | IPR036908 | - | |
Ahy1g1259 | 248 | PRINTS | Major pollen allergen Lol pI signature | 153 | 168 | IPR005795 | GO:0005576|GO:0019953 | |
Ahy1g1259 | 248 | PRINTS | Major pollen allergen Lol pI signature | 120 | 135 | IPR005795 | GO:0005576|GO:0019953 | |
Ahy1g1259 | 248 | PRINTS | Major pollen allergen Lol pI signature | 220 | 237 | IPR005795 | GO:0005576|GO:0019953 | |
Ahy1g1259 | 248 | PRINTS | Major pollen allergen Lol pI signature | 62 | 73 | IPR005795 | GO:0005576|GO:0019953 | |
Ahy1g1259 | 248 | PRINTS | Major pollen allergen Lol pI signature | 169 | 184 | IPR005795 | GO:0005576|GO:0019953 | |
Ahy1g1259 | 248 | PRINTS | Major pollen allergen Lol pI signature | 82 | 92 | IPR005795 | GO:0005576|GO:0019953 | |
Ahy1g1259 | 248 | Pfam | Expansin C-terminal domain | 151 | 226 | IPR007117 | - | |
Ahy1g1259 | 248 | PANTHER | EXPANSIN-B1-LIKE PROTEIN | 4 | 247 | - | - | |
Ahy1g1259 | 248 | Gene3D | - | 145 | 248 | IPR036749 | - | |
Ahy1g1259 | 248 | Gene3D | - | 20 | 144 | IPR036908 | - | |
Ahy1g1259 | 248 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 44 | 148 | IPR007112 | - | |
Ahy1g1259 | 248 | SUPERFAMILY | PHL pollen allergen | 149 | 243 | IPR036749 | - | |
Ahy1g1259 | 248 | PRINTS | Expansin/Lol pI family signature | 131 | 147 | IPR007118 | GO:0005576 | |
Ahy1g1259 | 248 | PRINTS | Expansin/Lol pI family signature | 190 | 204 | IPR007118 | GO:0005576 | |
Ahy1g1259 | 248 | PRINTS | Expansin/Lol pI family signature | 25 | 40 | IPR007118 | GO:0005576 | |
Ahy1g1259 | 248 | PRINTS | Expansin/Lol pI family signature | 230 | 244 | IPR007118 | GO:0005576 | |
Ahy1g1259 | 248 | PRINTS | Expansin/Lol pI family signature | 64 | 82 | IPR007118 | GO:0005576 | |
Ahy1g1259 | 248 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 162 | 244 | IPR007117 | - | |
Ahy1g1259 | 248 | PANTHER | EXPANSIN-B3 | 4 | 247 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy1g1259 | Ahy-Chr1 | 36002006 | 36004461 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy1g1259 | 14 | 246 | Expansin Gene Family | AT4G17030 | 48.085 | 1.84e-75 | 228 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy1g1259 | - | - | gmx:100779487 | 297.36 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g1276 | 11 | 42911542 | 42915125 | Ahy1g1259 | 1 | 36002006 | 36004461 | hybridization |