Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1257 ATGGGAGAATTACAAGGAGGAAAGCCAATTTTAGAAGCATGGAACAACAAAAAAGAAGAGGAAGAAGAAGAAGCACAAGCCCAATTAGAGATATGGAAATACATTTTTGGGTATGTGGAATTGGCAGTTATAAAATGTGCCATTGAACTTGGGATAGCTGATGCTATAGAGAGCCATGGTAGTCCCATGACACTCTCCGAAATTTCATCTACTTTAGGCTCTGACCCTTCCCTTCTTAACCGAATCTTGAGATTCTTAATTAACAGAAAGATATTCAAAGTCGATAAAAATTCAGATTCCACTACCACTTATGCCAACACGCCGTTATCTCGCCGTTTCCTGAAAAAGGGGCAGCAAAGCATGGCGGCGTTCCTCCTCCTAGAGAGCAGCCCCGTCATGCTTGCACCTTGGCACAGCCTAAGCGCCCGTGTTTCGGCAAACGGTGGAATAAACTTCCCCTTCGAGAAGGCACACGGCGAAGACGTGTGGGCCTACGCCGCGGAGAATCCGGGTCACAGCAACCTTATAAACGAGGCAATGGCGTGCAGTGCTAAGTTGGTGGTGCCTGCCATCGTTGAAGGTTGTGGCGACGAGGTGTTCGAAGGCGTGCAAACGTTGGTGGATGTTGGTGGTGGAACCGGCACCGCGTTGCGCGCCTTGGTTAAGGCTTGTCCTTGGATTCGAGGAATCAATTTTGATCTTGCTCATGTCATTGCTGTGGCTCCCAAGATTGAAGGAGTCGAAAATGTGGCTGGTGACATGTTTCTAGGTGTTCCCAAAGCTGATGCTGCTTTTCTTATGTGGGTTTTGCATGATTGGGGTGATGAGGAGTGCATCCAGATCTTGAAGAAGTGCAAGGAAGCCATTCCAAAGGAAAATGGAAAAGTGATCATTGTGGAGGCAGTGATTGAAGAGGGAGCAATAAAGCAAGGAAATTTAAAGGACGTAGGGTTGATGTTGGATATGGTAATGATGGCGCACACAAGCTTCGGCAAAGAGAGGACACTCGAAGAGTGGGAATATGTTATCAAAATGGCTGGATTTACTTCATACACTGTGAAAAACATCGATGCTGTGCAATCTGTGCTGTTGGCCTACCCATGA 1104 0.4692 MGELQGGKPILEAWNNKKEEEEEEAQAQLEIWKYIFGYVELAVIKCAIELGIADAIESHGSPMTLSEISSTLGSDPSLLNRILRFLINRKIFKVDKNSDSTTTYANTPLSRRFLKKGQQSMAAFLLLESSPVMLAPWHSLSARVSANGGINFPFEKAHGEDVWAYAAENPGHSNLINEAMACSAKLVVPAIVEGCGDEVFEGVQTLVDVGGGTGTALRALVKACPWIRGINFDLAHVIAVAPKIEGVENVAGDMFLGVPKADAAFLMWVLHDWGDEECIQILKKCKEAIPKENGKVIIVEAVIEEGAIKQGNLKDVGLMLDMVMMAHTSFGKERTLEEWEYVIKMAGFTSYTVKNIDAVQSVLLAYP* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1257 367 PANTHER O-METHYLTRANSFERASE 16 366 IPR016461 GO:0008168
Ahy1g1257 367 Gene3D - 13 113 IPR036388 -
Ahy1g1257 367 CDD AdoMet_MTases 205 299 - -
Ahy1g1257 367 Pfam O-methyltransferase domain 137 348 IPR001077 GO:0008171
Ahy1g1257 367 SUPERFAMILY "Winged helix" DNA-binding domain 21 116 IPR036390 -
Ahy1g1257 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 367 IPR016461 GO:0008168
Ahy1g1257 367 Gene3D Vaccinia Virus protein VP39 115 365 IPR029063 -
Ahy1g1257 367 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 16 366 - -
Ahy1g1257 367 Coils Coil 11 31 - -
Ahy1g1257 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 364 IPR029063 -
Ahy1g1257 367 PIRSF O-mtase 10 367 IPR016461 GO:0008168
Ahy1g1257 367 Pfam Dimerisation domain 43 86 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1257 Ahy-Chr1 35752096 35753575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1257 44 353 Monolignol Biosynthesis Gene Families AT5G54160 37.188 1.39e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1257 K22588 - gmx:100782951 473.011