Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1248 ATGGTGGATAAGCGGCACAAAGTTCCTGCCGTCCGTGATTTTCCGAAAGGGTGTGGCTCAAACCCTTCAAGAACCGCACACGGTGATGCTGCAAAGGTTGTCCCTGGGAACCAGTATAAACGGGTTCCGGCTTTTAGAGACTTTCCTCCTTTGTGTGGACCAGATGCTTCTTCACATCTTAGTGAAGGTGAGGGTGAAACAGCAATTGATGCAGAAGAACAGGTGGAAAAGAATGTTCATTGTGATGGTGGAAAGGTACTGGATCTAGTTCAAGGTGATTCTGGTGGGAATGGTGTAGAAAAAGAGGAGGAGCTTGATGTAATTCGAACATGTGTTACGGTTCCTAAGGATGGCAACCGGGATAAGGTTGAAATGAATTCTTATAATTTGAAGGTTTCATCTCGCAGGGTGGTGCTAGCACTGATGTCTGAATCTGAATGTCCTTGGAGGAATGCTGCAAGAAAAAAGGGAAAGAAAGTCGGTTTTCGGTTGCATGTTGACATGTCTAATGCGAATACCAGGACTAGATTCTCGTTGAATCGGTCAAAGAAGCCTTTAAAGAAGAAAACGGGGAATGATAATTCTGAAAACATTGATGAATTTCAAGTTGTCAACAAATCACATGGTTCCAAGGCGGTTTATAGAAAGCTTGTACACGAAGAAGAAGCGAAGCTAGAAGGTAAGGCAAGTAGCTTTAGGAGTGTTGATTTACGAGCAGCTGAGATCCTTATGGGCAAAGGGAAATATCTTAACACCAACAGGATATTGGGATCTGTCCCTGGGGTCGAAGTTGGCGACGAATTTCAGTATAGGGTAGAGCTTGCCATGGTTGGCCTACATCAGCGGATTCAAAGCGACATAGATTATGTTAAGCATAATGGGAAGACCCTCGCCATGAGTGTTATCACATTGGGAGGCTATGAGGACGAGTTAGATGATTCAAATGTCTTGATATACACAAGTTTGGTTGGAAATAATACTGATAAAGAAGTCGAAGATCAGAAGCTTGAGCAGTGCAACCGTGCTTTAAGGAACAGCATTGAGGAAAAGAATCCTGTTAGGGTGATAAGGGCCACTGAATCAATGCACGGAAAGGATAAGAAATATGTCTATGATGGACAATATGTGGTTGAGAATTGTTGGCAGGATGAGGGGCTGCACGGTTCGCCGGTTCTTAGATATCGGCTGCAAAGGATCCCAGATCAACCGGAGCCTTCTTGGAAAGAAGTAAAGAAATCTGAAAATTTGAGAGATAGAGAAGGTCTATTTGTTCATGACATTTCAAATGGGAAAGAGCTAATTCCAATTCATGCTCTCAACACCATAGATGACCAAAATGTTCCATCATTTGTGTATGTTACAAGAATGATATATCCAAATTGGTGCAATCCTATTCCTCGGAAAGGCTGTAATTGTGTTGGAACATGTTCAGAATCAGAGAAATGTCCTTGTGCTGCGAAAAATGGTGGTGATATCCCATTCAACCATGATGGGGCCATTGTAGAAGCAAAGCCTCTAATCTATGAGTGTGGACTTTCTTGCAAGTGCCCTTCAACATGCCACAATAGAGTTAGCCAACATGGCGTGAAGTTCCAACTTGAAGTCTTCAAAACCGATTCAAGAGGTTGGGGTGTGAGATCATTGAATTCAATCCCTTCAGGGAGTTTTATCTGTGAGTATATGGGGGAGCTTCTTGGAGAGGATGAAGCTGAAGAAAGAGTTGACAATGATGAGTATCTTTTCGATATCGGCAATAATAACCAAAAGAGCCATGCCCTTTGGGATGAACTCTCAGTGGTTATGCCTGATGCACACTCAAATTCTTCTTGTGAAGTTGTGGAGGATGGTGGATTCACCATTGATGCTGCACACTATGGTAATGTTGGAAGATTCATCAACCATAGTTGCTCACCTAATCTGTATGCACAGAGTGTGCTTTATGATCATGATGATAAGAGGATTCCCCACATAATGCTGTTTGCGACTGAAAATATTCCACCATTGCAAGAGTTGACTTATGATTACAATTACAAGATAGATGAGGTTTTTGACTCTCATGGGAACATCAAGAGGAAGAATTGCTATTGTGGTTCCATGGAATGCACTGGTAGGATGTATTGA 2121 0.4243 MVDKRHKVPAVRDFPKGCGSNPSRTAHGDAAKVVPGNQYKRVPAFRDFPPLCGPDASSHLSEGEGETAIDAEEQVEKNVHCDGGKVLDLVQGDSGGNGVEKEEELDVIRTCVTVPKDGNRDKVEMNSYNLKVSSRRVVLALMSESECPWRNAARKKGKKVGFRLHVDMSNANTRTRFSLNRSKKPLKKKTGNDNSENIDEFQVVNKSHGSKAVYRKLVHEEEAKLEGKASSFRSVDLRAAEILMGKGKYLNTNRILGSVPGVEVGDEFQYRVELAMVGLHQRIQSDIDYVKHNGKTLAMSVITLGGYEDELDDSNVLIYTSLVGNNTDKEVEDQKLEQCNRALRNSIEEKNPVRVIRATESMHGKDKKYVYDGQYVVENCWQDEGLHGSPVLRYRLQRIPDQPEPSWKEVKKSENLRDREGLFVHDISNGKELIPIHALNTIDDQNVPSFVYVTRMIYPNWCNPIPRKGCNCVGTCSESEKCPCAAKNGGDIPFNHDGAIVEAKPLIYECGLSCKCPSTCHNRVSQHGVKFQLEVFKTDSRGWGVRSLNSIPSGSFICEYMGELLGEDEAEERVDNDEYLFDIGNNNQKSHALWDELSVVMPDAHSNSSCEVVEDGGFTIDAAHYGNVGRFINHSCSPNLYAQSVLYDHDDKRIPHIMLFATENIPPLQELTYDYNYKIDEVFDSHGNIKRKNCYCGSMECTGRMY* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1248 706 MobiDBLite consensus disorder prediction 1 30 - -
Ahy1g1248 706 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 211 705 - -
Ahy1g1248 706 ProSiteProfiles SET domain profile. 531 676 IPR001214 GO:0005515
Ahy1g1248 706 ProSiteProfiles Pre-SET domain profile. 468 528 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy1g1248 706 SMART set_7 531 682 IPR001214 GO:0005515
Ahy1g1248 706 Pfam SAD/SRA domain 256 402 IPR003105 -
Ahy1g1248 706 Pfam Pre-SET motif 427 523 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy1g1248 706 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 211 705 - -
Ahy1g1248 706 Gene3D - 239 418 IPR036987 -
Ahy1g1248 706 ProSiteProfiles YDG domain profile. 257 398 IPR003105 -
Ahy1g1248 706 SUPERFAMILY PUA domain-like 239 413 IPR015947 -
Ahy1g1248 706 ProSiteProfiles Post-SET domain profile. 690 706 IPR003616 -
Ahy1g1248 706 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 103 706 IPR025794 GO:0016571
Ahy1g1248 706 SMART preset_2 424 515 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy1g1248 706 SUPERFAMILY SET domain 418 683 IPR046341 -
Ahy1g1248 706 Pfam SET domain 542 676 IPR001214 GO:0005515
Ahy1g1248 706 Gene3D SET domain 419 706 IPR046341 -
Ahy1g1248 706 SMART G9a_1 252 402 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1248 Ahy-Chr1 35017260 35020303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1248 167 703 Su(var)3-9 homologs AT5G04940 36.477 4.75e-110 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy1g1248 SAD_SRA 3.20E-43 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1248 K11420 - adu:107484449 1439.48