Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1208 ATGAACTGTTTGTTCTTCAAGGAGAAGCGCAAGGAGAAGTGCAGGTCGGCACCGGAGCTGGAGCAGCAGAATCGAGGAGGGGCGAAGAAGAAGGATCCGGCTTTGAACCGCGCCACGAACTCCACCGGCTCCATACAATCGCCGAGAAGCGTGAAGGAATTGTACAAGGAGAAAGAGAAAGAGAGCAATTTCAGGGTTTTCACGTGGCAGGAGCTGAAAGATGCTACAAGCGGTTTCAACAAGATGCTCAAGATTGGCGAAGGAGGGTTTGGGAGTGTGTATAGAGGTTCCATTAGTCCTCCAGATGGAAAAGGTGAACCGATTGTTGTTGCCATCAAGAAGCTTAACCCACGTGGCTTCCAGGGTCATAAAGAATGGCTTGCGGAAGTTCAATTTCTAAGCATTGTTAGTCACCCAAATCTTGTTAAGCTTTTGGGATACTGCTCTGTGGATGGCGAAAGAGGGATCCAGCGGCTGTTGGTGTACGAGTTCATGCCCAACAGAAGCCTTGAAGATCACCTCTTCAGTAAAACTTTACCTCCTCTTACTTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCGTATCTACATGAGGGGCTAGAGATTCAGGTGATATACCGAGATTTCAAGTCATCAAATGTTCTATTAGATGAGAATTTCCACCCAAAGCTTTCAGATTTCGGTCTTGCTAGGGAAGGTCCCCAAGGTGACCATACTCACGTCTCTACTGCAGTAGTTGGTACTCAGGGATATGCTGCTCCAGAGTACATTGAAACAGGTCACCTCAAAGTTCAGAGTGACATGTGGAGTTTTGGCGTTGTCCTGTACGAGATCATTACTGGAAGGCGATCGCTAGAAAGAAACCGTCCTACTCCGGAACAAAAGCTACTAGATTGGGTTAAACAACACCCTGCTGATAGCAACAGGTTCACAATGATAATCGATCCCCGTCTTAGGAACCAATATTCCCTCCCTGCGGCTCGCAAGGTAGCCAAGTTGGCCGACAGCTGCTTAAAGAAGAATCCTGAAGATAGACCAACCATGAATCAAATAGTTGAGAGCCTGAAGCATGCATTGCAAATCTCAGAAATGACAAGCAGTTCAAGCAATGTTGGCGAATCGTCACGATCGAAATTGGGCCGAAAAGGTAAATAG 1170 0.4692 MNCLFFKEKRKEKCRSAPELEQQNRGGAKKKDPALNRATNSTGSIQSPRSVKELYKEKEKESNFRVFTWQELKDATSGFNKMLKIGEGGFGSVYRGSISPPDGKGEPIVVAIKKLNPRGFQGHKEWLAEVQFLSIVSHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHLFSKTLPPLTWKTRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDENFHPKLSDFGLAREGPQGDHTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEIITGRRSLERNRPTPEQKLLDWVKQHPADSNRFTMIIDPRLRNQYSLPAARKVAKLADSCLKKNPEDRPTMNQIVESLKHALQISEMTSSSSNVGESSRSKLGRKGK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1208 389 MobiDBLite consensus disorder prediction 14 32 - -
Ahy1g1208 389 Gene3D Transferase(Phosphotransferase) domain 1 165 383 - -
Ahy1g1208 389 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 24 383 - -
Ahy1g1208 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Ahy1g1208 389 SUPERFAMILY Protein kinase-like (PK-like) 55 360 IPR011009 -
Ahy1g1208 389 MobiDBLite consensus disorder prediction 14 51 - -
Ahy1g1208 389 MobiDBLite consensus disorder prediction 367 381 - -
Ahy1g1208 389 CDD STKc_IRAK 85 361 - -
Ahy1g1208 389 Gene3D Phosphorylase Kinase; domain 1 50 164 - -
Ahy1g1208 389 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Ahy1g1208 389 PANTHER OS01G0588500 PROTEIN-RELATED 24 383 - -
Ahy1g1208 389 MobiDBLite consensus disorder prediction 367 389 - -
Ahy1g1208 389 ProSiteProfiles Protein kinase domain profile. 79 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1208 389 MobiDBLite consensus disorder prediction 35 49 - -
Ahy1g1208 389 Pfam Protein tyrosine and serine/threonine kinase 83 360 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1208 Ahy-Chr1 32480013 32483370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1208 1 360 Glycoside Hydrolase AT3G07070 42.120 1.98e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy1g1208 PK_Tyr_Ser-Thr 2.80E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1208 - K00924 adu:107483795 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1220 11 38892911 38896269 Ahy1g1208 1 32480013 32483370 hybridization
Ahy5g0452 5 5305773 5308094 Ahy1g1208 1 32480013 32483370 PCT
Ahy1g1208 1 32480013 32483370 Ahy5g0452 5 5305773 5308094 PCT