Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1203 ATGGGAACTAATCATGTTATGGATGAGGCTGATAAGCTTTTGTCCCCAAAATTCCAACATTCTATAGTTATTAATTTTGATTTTCCCAAGAATTCAGAAACTTATCTCCATAGGGCCAGTCGCTTAGGGAGCTTTGGGCATCTTGGTTTAGCAGTTAACTTGATCACTTATTGGGACCACTTTAATTTATATTTTGCTAACATTAGTAACATCAGTTTGGGGGGAATGAGAAGAGTTTTCAATTTCCCTCAGGGACAGAGAGAACAGTTGGCCTGCACTTGGACGTCTCACACCCTAATTTACTTCCGAAAGAGATTATTCGTGAAGTGTATTGTGGAGCTTTCCATTTGGTTCCTTTATCCGAGGAAGGCCTAG 375 0.4 MGTNHVMDEADKLLSPKFQHSIVINFDFPKNSETYLHRASRLGSFGHLGLAVNLITYWDHFNLYFANISNISLGGMRRVFNFPQGQREQLACTWTSHTLIYFRKRLFVKCIVELSIWFLYPRKA* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1203 124 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 22 65 - -
Ahy1g1203 124 Gene3D - 17 73 IPR027417 -
Ahy1g1203 124 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 12 22 65 - -
Ahy1g1203 124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 65 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1203 Ahy-Chr1 32319323 32325113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1203 19 56 Eukaryotic Initiation Factors Gene Family AT3G13920 55.263 9.40e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1203 K12614 - ahf:112801452 262.307