Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1193 ATGTGGGAAGCGAGAGTGAAGGACTTGAGTATGAGTGCATTGGTGAGGCTGAGAGTGAGTGAAGCAGGCTACAAGGGGCAATCGAGGCTCAATAATAACTGTCTTCATGGTGAATTGCCAGAATCATTAGCTAATATGACACAACTTACTTTTCTTGACTTGTCCTACAACAATATCAGTGGTCTTATACCAAGAATTTTAGCTAAATTCTTCAGCATTGTTCGAAATTCCCTTATTTGTGCAACTGGAAAAGAACCAAACTATCGTGGCATGACACTGATGCCAATGTCCATGAACTTAAATAGCACTGAAGTTTCGGCCTTGTTCTTTGGTGTAGGCACAAGCACAATCAATAAGCATTCTTTGATGTTAAAGTTCCCTCAATTCATATACAGTTTAATGTTGAATGTTTTTTATGTTTCAAACCGGCATCACGAAGAAGTATACCTTGAAAACTTGAAGATGTTCCACTTCAGAGAACTCCAAGTTACTACCAATAACTTCAACAACAAGAACATTCTTAGAAAGGGTGGTTTTGAAAATGTCTACAAAGGAGTTCTCTCTGGTAGAAGTCTTGTAGCTGTCAAGAGACTGAAAAATGGCAATGCTATTAGAGGAGAAATTCAATTTCAGACTGAAGTCAAAATGATCAGCCTCGCCGTCCACTGGAACCTCCTCAGACTCTATGAATTCTGCATGACACCAACAGAAAGGCTTTTAGTTTACCCTTACATGTCCAATGGCAGCATTGCTTCACGTCTGAAAGTGGTAAAGAAAAGTGTAGCATATTATGGTAATATGAGGCGTCGCATTCGGAAGTTCTGTCGCCATCGCAGGAGCTATGTCACCGTTGTAGGAAGCTCCGTCGCCGTCCTAGGAAGCTGTGTCACCGTTGTAGGAAGCTTCCTCGCCGTCGTGTGGAAGCTCTATGGCTGTCGTCTCCTCTGTTCAAGCGCGCTCTCTTTCTCTTCGCCGGTGTCACTCCCTTTCCTCCTCGCCGCCGGTAAGCACTGTGGCTTGGATTTTGATAATACTGTGCTTGCCGGTGTCACCTCCTCCTCCTCGTCTCCTCTATTTGCTGGTTTTACTGTTACTAATTGA 1101 0.4332 MWEARVKDLSMSALVRLRVSEAGYKGQSRLNNNCLHGELPESLANMTQLTFLDLSYNNISGLIPRILAKFFSIVRNSLICATGKEPNYRGMTLMPMSMNLNSTEVSALFFGVGTSTINKHSLMLKFPQFIYSLMLNVFYVSNRHHEEVYLENLKMFHFRELQVTTNNFNNKNILRKGGFENVYKGVLSGRSLVAVKRLKNGNAIRGEIQFQTEVKMISLAVHWNLLRLYEFCMTPTERLLVYPYMSNGSIASRLKVVKKSVAYYGNMRRRIRKFCRHRRSYVTVVGSSVAVLGSCVTVVGSFLAVVWKLYGCRLLCSSALSFSSPVSLPFLLAAGKHCGLDFDNTVLAGVTSSSSSPLFAGFTVTN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1193 366 Gene3D Phosphorylase Kinase; domain 1 137 244 - -
Ahy1g1193 366 ProSiteProfiles Protein kinase domain profile. 168 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1193 366 Gene3D Ribonuclease Inhibitor 9 80 IPR032675 -
Ahy1g1193 366 SUPERFAMILY L domain-like 30 109 - -
Ahy1g1193 366 SUPERFAMILY Protein kinase-like (PK-like) 140 260 IPR011009 -
Ahy1g1193 366 Pfam Protein tyrosine and serine/threonine kinase 171 257 IPR001245 GO:0004672|GO:0006468
Ahy1g1193 366 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 28 271 - -
Ahy1g1193 366 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 28 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1193 Ahy-Chr1 31354207 31360845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1193 29 302 Receptor kinase-like Gene Family AT5G16000 50.836 1.35e-84 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy1g1193 Pkinase 1.50E-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1193 - - ahf:112710653 702.59