Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1166 ATGGGAAGTGGAGTCTCTACCTTGTGTTCCTGCCTCGAACCGGCGCCGAACCAACCGGACCTCGACAACGACGTGATCTTCGCCGCCACCGAACCGCTTGACGAAACTCTCGGCCATTCCTTCTGCTATGTCAGATCCTCCAACCGATTCCTCTCGCCAACACACTCCGATCGCTTCGTTTCCCCCTCTGCCTCACTCCGTTTCTCTCCAACTCACGACCCGATCCACAGAACCCGGCCCGACCCACCCGAAACTGCTTTCAAGGCCATTTCGGGAGCCTCCGTTAGTGCCAACAGCTCCGTTCCCAAGACAGTTATTCAGTTAGAAGAAGAGGCCGCCGACTGTTCCGGTAACAGAGCAGCTGGATTAGGAGGAGGGACCGTTGTCAACGGTTTCGAGAGTACGTCGTCCTTTAGCGCGCTACCGCTCCAGCCGGTTCCTCGCAGTGGAGAGCCTTCTGGAACATTCGAGAGGGGAGGAGGGTTCTTCCTCTCGGGACCAATCGAGAGCGGTGCGCTCTCCGGGCCGCTTAATTCCGGCGCCGCCACCGCCGCCGGAGTCCCGTTCTCGGCCCCGCTGGGAGGGGTGTACGTGAGGAAAAAGAGGAAGAATGGCGTGTCCGGATTCAGGAAGGCGTTTCAGAGGGGTGTGCCAGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTCGTCGGGAGGAAGGAAGTTCAGGCTTGCGAGGGGAAGCCGGCGACGGTTGGGGCGGATGACGTGGCGAGAGAGGAGAGCAATGTGCAGTGGGCGCTGGGGAAGGCTGGCGAGGACAGGGTGCACGTGGTGGTGTCGGAGGAGCAAGGTTGGTTGTTCGTTGGGATTTACGACGGTTTCAACGGCCCCGACGCGCCGGAGTTCCTGATGGGACATCTCTACCGTGCCGTCCACAACGAACTTCAGGGTCTGTTCTGGGAAGCTGAAGAAGCAGAGGGCAGAAAGGACAATATTCCCGCTGCTGAAGTTGCTGCTGAGGTGAAAAACAGTGAGGGAGATGCCATTGAAGACTCGATCTCTCACTCGGCGACTGCGGCTGTTAAGAAGGTAACGTTTCAGGTGGAGGGAACGGAAAGCAGGAGGCGTAGGCTGTGGGAATTTCTTGCTGAGGACCCTGAAGACGGCCTTGACCTTTCTGGTTCCGATAGGTTTGCGTTTTCCGTGGATGATGCTCTCAGTGTTAACAATGCCAATGCTGGCTCCGCTGTTAGCAGAAGGTGGCTGCTGTTGTCGAAATTGAAGCATGGGTTGTCCAAGCATAAAGAGGGTCAAGGTAGGAGGCTGCTGCCGTGGAGCTTTGGTGCGGAAGGGAAGGATGAGAAGGTGGAAACAGAGGCAGAGAACCCAGCTGAGGAGAAGTTTTCTTCCGGTGGAGGCCGCAGTGGTGGGAGGAGGAGGAAGGTTGGCCCGGTGGACCATGATCTTGTTTTGAGGGCATTATCTCGTGCGCTCGAGGTGACCGAGCTGGCATATTTGGATATGACTGATAAGCTTCTGGATACGAATCCAGAACTTGCTTTGATGGGTTCGTGTTTGTTGGTTTCTCTGATGAGGGATGAGGATGTGTATGTGATGAACGTTGGGGATAGCCGCGCTATTGTTGCTCATTATGAGCCCAAAGAGGGCGCTGCTGCTTGTACAGGATCCAGATTCAAGAGCACGGAGAGTATTGTTGAGGAGTCCTCGGCAGGTGAAAGCACAGGCAAGTTGGGGAACGAGGATCCTGCTCCGGAAATGAGGTTGGCAGCATTGCAGCTGTCAACTGACCACAGCACCTGCATTAAAGAAGAAGTCAATAGAATTAAAAATGAGCACCCTGATGATGCGCAATGCATAGTCAATGATAGAGTAAAAGGTCGTCTCAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGCTGAATGATGCGGTGTTAGAAATGTTTCGGAACGAGTATATTGGCACTGCTCCATATATATCCTGCTCTCCTTCGCTACGTCACCATAGATTATGCCCTAGAGATCAGTTCTTGATTCTCTCATCTGATGGGTTATATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTGGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCTCAACATTTAATTGAAGAGCTGCTTCTCCGTGCAGCAAAGAAGGCTGGCATGGGTTTTCATGAGTTGCTTGATATCCCACATGGAGATAGGAGGAAATACCATGATGATGTCACTGTCATGGTGATATCACTTGAAGGAAGAATCTGGAAATCCTCTGGGAGGTATCTGTGA 2322 0.5336 MGSGVSTLCSCLEPAPNQPDLDNDVIFAATEPLDETLGHSFCYVRSSNRFLSPTHSDRFVSPSASLRFSPTHDPIHRTRPDPPETAFKAISGASVSANSSVPKTVIQLEEEAADCSGNRAAGLGGGTVVNGFESTSSFSALPLQPVPRSGEPSGTFERGGGFFLSGPIESGALSGPLNSGAATAAGVPFSAPLGGVYVRKKRKNGVSGFRKAFQRGVPEKKRPWVVPVLNFVGRKEVQACEGKPATVGADDVAREESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEAEEAEGRKDNIPAAEVAAEVKNSEGDAIEDSISHSATAAVKKVTFQVEGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKHGLSKHKEGQGRRLLPWSFGAEGKDEKVETEAENPAEEKFSSGGGRSGGRRRKVGPVDHDLVLRALSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVSLMRDEDVYVMNVGDSRAIVAHYEPKEGAAACTGSRFKSTESIVEESSAGESTGKLGNEDPAPEMRLAALQLSTDHSTCIKEEVNRIKNEHPDDAQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCSPSLRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMGFHELLDIPHGDRRKYHDDVTVMVISLEGRIWKSSGRYL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1166 773 Gene3D - 243 768 IPR036457 -
Ahy1g1166 773 MobiDBLite consensus disorder prediction 566 585 - -
Ahy1g1166 773 ProSiteProfiles PPM-type phosphatase domain profile. 251 761 IPR001932 -
Ahy1g1166 773 SUPERFAMILY PP2C-like 265 762 IPR036457 -
Ahy1g1166 773 PANTHER PROTEIN PHOSPHATASE 2C 29 18 771 - -
Ahy1g1166 773 PANTHER PROTEIN PHOSPHATASE 2C 18 771 IPR015655 GO:0004722|GO:0006470
Ahy1g1166 773 CDD PP2Cc 482 761 IPR001932 -
Ahy1g1166 773 MobiDBLite consensus disorder prediction 448 478 - -
Ahy1g1166 773 Pfam Protein phosphatase 2C 492 725 IPR001932 -
Ahy1g1166 773 SMART PP2C_4 252 759 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1166 Ahy-Chr1 29827474 29832699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1166 1 773 PP2C-type Phosphatase Gene Family AT2G35350 55.650 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1166 - - mtr:MTR_4g098650 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1170 11 35431391 35437187 Ahy1g1166 1 29827474 29832699 hybridization
Ahy5g0480 5 5780710 5785981 Ahy1g1166 1 29827474 29832699 PCT
Ahy1g1166 1 29827474 29832699 Ahy5g0480 5 5780710 5785981 PCT