Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1161 ATGGGAGGGGCATCACTGCCACCTGGATTTCGTTTCCACCCAACGGATGAAGAATTATTGGGATATTACCTAAAAAGAAAAGTGGAAGGGCTTGAAATTGAGCTTGAGGTTATTCCTGTGATTGATTTGTGCAAGTTTGATCCTTGGGAATTGCCCGAGAAATCATTGTTGGCAAACAGAGACATGGAATGGTTCTTCTTTTGTCCAAGGGACCGCAAGTACCCAAATGGATCAAGAACTAACAGAGCCACCAAAGCTGGTTATTGGAAAGCCACTGGAAAAGACAAGAAAGTTGTGTGCCAATTTGATACTCCTTCCACTGTCACAGGATATAGAAAAACCCTTGTCTTCTACCGTGGCAGAGCCCCTTTAGGTGACAGAACTGATTGGCTCATGCATGAGTATCACCTCGCCGATGATCTCGGCCTAGCATCTACATGTTTTCAGGGTGGTTATGCCTTGTGTCGGGTTATTAAGAAGAATGAGAAGGTGAACAATGGGAATGATGCGTCAATGAGATTCTCCAATGAGCCCTTCTCCATTTCTGCTGATGCTTCATCTTCTCAACCAAGTTATTTGAACAGTGAGAGTGTTTACTCAAGCCCCAATGCTTCTTCACACAATGTGGCTCCAATGGCAGACTCTAACCAAGCTTCTATAAACACCAGTTCTTCATCAGAATTTTGGGTGTCCCCTGATCTGATTCTTGATTCTTCAAAGGACTACCCGCAACTAGAAAATACTTTTACAAGGTGTGACATACCAAGTAGTACAATGACACCATGCCTCTCATTGGATCAACCTGAAATTTCACCTTGTTCATCATACTCAAATTTTAATGGGCAACTTGGATTTTCCGATGATTTCAATATGATTGGCGGCATGTCACCTTACTCAATACAAGAAGATTTTACGTACTTTCATGGAAATGATGGGGATGTTTCTTATGGAAGTTATGATCATATTAATTCAGTTGAGTACCCTGAATACTTCTGA 996 0.4187 MGGASLPPGFRFHPTDEELLGYYLKRKVEGLEIELEVIPVIDLCKFDPWELPEKSLLANRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQFDTPSTVTGYRKTLVFYRGRAPLGDRTDWLMHEYHLADDLGLASTCFQGGYALCRVIKKNEKVNNGNDASMRFSNEPFSISADASSSQPSYLNSESVYSSPNASSHNVAPMADSNQASINTSSSSEFWVSPDLILDSSKDYPQLENTFTRCDIPSSTMTPCLSLDQPEISPCSSYSNFNGQLGFSDDFNMIGGMSPYSIQEDFTYFHGNDGDVSYGSYDHINSVEYPEYF* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1161 331 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Ahy1g1161 331 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 331 - -
Ahy1g1161 331 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Ahy1g1161 331 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
Ahy1g1161 331 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 331 - -
Ahy1g1161 331 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1161 Ahy-Chr1 29507943 29511198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1161 1 252 NAC Transcription Factor Family AT4G17980 58.268 1.66e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy1g1161 NAM 3.30E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1161 - - aip:107605232 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1167 11 35134944 35137987 Ahy1g1161 1 29507943 29511198 hybridization