Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1156 ATGGGTTGCACTGTGAGGGAAAAGCACATCAGAGCGAATCGGAGGCCCCGATCATCATCGAAACCCGATTCTGATTCGTGCGACAGAGACCCGATTTCCAAATCCATAGCTGAGTCTGGCCTCAAGCCCTTCAGGTACCATCACCATGTGCCTCCCAACAACAACAACAACAACAACGAACCTTCTTCTACCCAGAACACGAACCCTAACTCCGATGAAACGGGTTGGGGTTACTGCACGGAGGAACAGTTGGAGGAGATCCTCTTGAAGAACCTCGAATTCATTTACAACGAAGCGGTTTCCAAGCTCGTCGCTTTGGGTTACGATGAGGACGTTGCGGTCAAAGCTATTTTGAAAAACGGCCATTGCTACGGTGGAATGGATGTTCTCACCAACATACTACATAATTCGTTAGCCTACTTGAATAATAATAATAGCAATAATAATAATAGTGCTGGAAATGGTGGGAATTTGGACGAGAGTGAGGCTGCTTTCTCTGATTTGAGGCACTTGGAGGAGTATTCTCTTGCTGGTATGGTGTGTTTGTTGCAACAGGTGAGGCCTCATTTGAGCAAAGGTGATGCAATGTGGTGTTTGCTAATGAGTGATCTTCATGTTGGTAGGGCCAGCACTATGGAGATTCCGGTCCCGGGAAGTGGGTACCCGAGTACTGCCACTGTGGCTGCCACGGTTGAAGGTGGTGGTAATTCGGTGGTAGTTGGTGATGGTGGTGGCAATTCGGCGGTTGGTGGTGGTGGTGTTATGGCTCCTGCATTGTGTAGATTTCATGGTGGTTGGGGATTTGGGAATGGGGCAGGCTCAGGGTTTCAGGCGAATGGGTTGTTCTCTTATGGTGCTGCTGAGATGAATTTGCATCTGCAAAGGGATATTGAGTTCCCTAAGAGGTTTAATCTTTCGCCTTCAATGAAATCATTGTTGAAGAGGAATGTGGCTGCGTTTGCTGCTGGTTTTAGGGCGAATTCGAAGCAATTGCAGACTCAGGCTCAGGTGAAGGCCTTTTCTGGTAGTGCTGCTGTGTCGAAGTTGGATTCTCCGGCTGTGAATGGGGCACAAGCACTGGTTGAGCAGCCTGGACAGGTGGGAGAATCTCAGAATGTTGATAGCCAAGATGCTGTGAATTCAGTGCTGAGTAAGTTTCGTGATCTTAATCTTGATGAGAATTTGGAGCTTGTGGCGGATGATCAGAAGGATGAGGTGATAGTCACTTTGTTTCATCAGATCAAGGATCTTGAGAAACAGGTCAAGGAGCGAAAAGATTGGGCTCATCAGAAGGCAATGCAAGCTGCGAGAAAGCTAAGCAGTGATCTTACTGAGCTCAAGATGTTGAGGATGGAAAGAGAGGAGACTCAGAGATTGAAGAAAGGGAAACAGGCACTCGAGGACACCACCATGAAGAGGCTCTCAGAGATGGAAAATGCTTTGAGAAAGGCTAGTGGTCAAGTGGACCGTGCGAATGCAGCCGTGAGGAGACTAGAGACAGAGAATGCGGAAATTAAAGCAGAGATGGAGGCTTCCAAGTTAAGTGCATCAGAGTCCGTGACAGCTTGCTTAGAGGTTGCAAAAAGGGAGAAAAAATGCTTAAAGAAGCTTCTAGCTTGGGAGAAACAGAAAGCTAAGCTGCAGCAGGAGATTGCTGATGAAAAAGCAAAGATATCGGAGACACAAGAAGTCTTGGCTCAGATTAGACAGCGCCAAAAAGACGCGGAGGTTAAGTGGAAAGAAGAGGTGAAGGCTAAAGAGGAAGCTTCAGCACTAATCGAAGAGGAGCGCCACTCTAAGGAAGCAGCTGAATCTAATAATAAGAGGAAACTCGAGGCTCTACGTCTGAAGATTGAGATAGATTTCCAGCGCCACAAGGACGATCTACTGCGACTTGAGCAAGAGCTCTCACGGCTTAAAGCGTCTGCACAGTCTGCCGAGCTGCATCATCAGTCAAATGCTGCTTCACCTGTTGGTGGCAACTCTGAGGGCGCAATGCCCCAGAGAGATACAATTGCCAAGCTACTTCAAGAACTAAATAATCTAGAGGATTATTCGGAGAAGGAAGTCAATGGCAACAGAGAATGCATTATATGCATGAAAGATGAAGTTTCCGTTGTTTTCTTGCCGTGTGCACACCAAGTTATGTGTGCCGGTTGCGGCGATGAGTATGGAAGAAAGGGAAAAGCTGCTTGTCCTTGCTGCAGGGTTCCGATCCAACAGCGAATTCGGGTGTTTGGTGCAAGCTCATAG 2253 0.4758 MGCTVREKHIRANRRPRSSSKPDSDSCDRDPISKSIAESGLKPFRYHHHVPPNNNNNNNEPSSTQNTNPNSDETGWGYCTEEQLEEILLKNLEFIYNEAVSKLVALGYDEDVAVKAILKNGHCYGGMDVLTNILHNSLAYLNNNNSNNNNSAGNGGNLDESEAAFSDLRHLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASTMEIPVPGSGYPSTATVAATVEGGGNSVVVGDGGGNSAVGGGGVMAPALCRFHGGWGFGNGAGSGFQANGLFSYGAAEMNLHLQRDIEFPKRFNLSPSMKSLLKRNVAAFAAGFRANSKQLQTQAQVKAFSGSAAVSKLDSPAVNGAQALVEQPGQVGESQNVDSQDAVNSVLSKFRDLNLDENLELVADDQKDEVIVTLFHQIKDLEKQVKERKDWAHQKAMQAARKLSSDLTELKMLRMEREETQRLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSASESVTACLEVAKREKKCLKKLLAWEKQKAKLQQEIADEKAKISETQEVLAQIRQRQKDAEVKWKEEVKAKEEASALIEEERHSKEAAESNNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASAQSAELHHQSNAASPVGGNSEGAMPQRDTIAKLLQELNNLEDYSEKEVNGNRECIICMKDEVSVVFLPCAHQVMCAGCGDEYGRKGKAACPCCRVPIQQRIRVFGASS* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1156 750 MobiDBLite consensus disorder prediction 16 32 - -
Ahy1g1156 750 Coils Coil 474 515 - -
Ahy1g1156 750 MobiDBLite consensus disorder prediction 643 659 - -
Ahy1g1156 750 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 749 - -
Ahy1g1156 750 Coils Coil 530 578 - -
Ahy1g1156 750 ProSiteProfiles Zinc finger RING-type profile. 696 736 IPR001841 -
Ahy1g1156 750 MobiDBLite consensus disorder prediction 643 666 - -
Ahy1g1156 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 680 747 IPR013083 -
Ahy1g1156 750 SMART ring_2 696 735 IPR001841 -
Ahy1g1156 750 Pfam Family of unknown function (DUF6592) 91 210 IPR046527 -
Ahy1g1156 750 SUPERFAMILY RING/U-box 695 742 - -
Ahy1g1156 750 MobiDBLite consensus disorder prediction 50 76 - -
Ahy1g1156 750 PANTHER OS05G0141500 PROTEIN 1 749 IPR046934 -
Ahy1g1156 750 Pfam Zinc finger, C3HC4 type (RING finger) 693 741 - -
Ahy1g1156 750 MobiDBLite consensus disorder prediction 1 76 - -
Ahy1g1156 750 Coils Coil 622 649 - -
Ahy1g1156 750 Coils Coil 586 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1156 Ahy-Chr1 29314528 29320653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1156 676 746 C3H Transcription Factor Family AT1G73950 34.667 2.15e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1156 - - adu:107483267 1349.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1161 11 34889869 34896306 Ahy1g1156 1 29314528 29320653 hybridization
Ahy5g0484 5 5802972 5806131 Ahy1g1156 1 29314528 29320653 PCT
Ahy1g1156 1 29314528 29320653 Ahy5g0484 5 5802972 5806131 PCT