Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1138 ATGGAATCGTCATCACCTAGCTGGTTACATGATCTGGAAATGGAAGATGATTACAACAATTTCTTTCCGAAAGAGTACAGGATGAACAACTCGATTGATGATTATGATGAAGATTTATTTTTCGCACATGACATGGGGAATTCAATAATGTTCGAGTCACCAAGCAATAATAATAATTACTCTTCCGTTGATGAAACTAGTTTTGATGATGAGAGGCCTTCTAAGTTTCTCAAAACAAGTACCAATACTGATAATAATTCTTATTATTCATCATTATCACCAAATTTTTCTTCCCTCTCATCATCATCAATAACATCATTTCAGCCACAAATTCTGTGCTTTGACAACTCAAACTCCTCTCTCAATAATAATGATAATACCACCCAGCTTTATGATTTAGATTATACAACCTTGAACACAGAGACAAAACTAAAAGAGGTGGAAAATGGGTCATCAAAAAATCAAAACCTGGTCACAAAATCCTCATCAAAGGGTTCTAAGAGATCACCATCTAACGCTCAGGATCATATCATAGCTGAGAGGAAGAGAAGAGAGAAGATCAGCCAGAGTTTCATTGCTCTTGCAGCTCTTGTTCCTGGCCTCAAGAAGATAGACAAAGTTACTGTGTTAGAGAATGCAATCAAGTACGTGAAGGATCTCAAAATTCGTCTTACAACACTAGAACAAGAAAATAATGAAAAAATAAAGGAAATAGTAGAAGAGCCTTCTGTGATTGTTCTTAACAAAAGGTCACCACATGATAATGAGAGTGACGATGAGAGCGTTATTGTTGATAATACTTCTAATCATGATTCTTCTTCACTTCTCCATCATGTGGAAGCAAGAGTATCAGGGCAACATGTTTTGATTCGGATTCAGTGTCAAAAGCATAAGGGTATTTTGGTCAAATTACTTTCTGAGATTCAAGGACATAACCTGCTTGTTTTAAATAGTAGTGCGTTGCCTTTTGGAGATTCGGTTCTTGATATAACTATCATTACTCGGATGGGCGAAGGGTACAATTTGACCGTTAAGGAACTTGTCAAGAGCATACGCGTGGAAACATTGAAGTTCATCTTGTCATAA 1086 0.3637 MESSSPSWLHDLEMEDDYNNFFPKEYRMNNSIDDYDEDLFFAHDMGNSIMFESPSNNNNYSSVDETSFDDERPSKFLKTSTNTDNNSYYSSLSPNFSSLSSSSITSFQPQILCFDNSNSSLNNNDNTTQLYDLDYTTLNTETKLKEVENGSSKNQNLVTKSSSKGSKRSPSNAQDHIIAERKRREKISQSFIALAALVPGLKKIDKVTVLENAIKYVKDLKIRLTTLEQENNEKIKEIVEEPSVIVLNKRSPHDNESDDESVIVDNTSNHDSSSLLHHVEARVSGQHVLIRIQCQKHKGILVKLLSEIQGHNLLVLNSSALPFGDSVLDITIITRMGEGYNLTVKELVKSIRVETLKFILS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1138 361 MobiDBLite consensus disorder prediction 52 84 - -
Ahy1g1138 361 Pfam Helix-loop-helix DNA-binding domain 175 220 IPR011598 GO:0046983
Ahy1g1138 361 PANTHER BHLH TRANSCRIPTION FACTOR 2 359 - -
Ahy1g1138 361 SMART finulus 177 226 IPR011598 GO:0046983
Ahy1g1138 361 MobiDBLite consensus disorder prediction 145 175 - -
Ahy1g1138 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 240 IPR036638 GO:0046983
Ahy1g1138 361 Gene3D - 162 237 IPR036638 GO:0046983
Ahy1g1138 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Ahy1g1138 361 MobiDBLite consensus disorder prediction 145 173 - -
Ahy1g1138 361 Coils Coil 210 237 - -
Ahy1g1138 361 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 2 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1138 Ahy-Chr1 26073379 26081980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1138 5 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 32.782 3.12e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy1g1138 HLH 6.30E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1138 - - ahf:112720570 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1044 11 25941759 25951464 Ahy1g1138 1 26073379 26081980 hybridization