Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1136 ATGGCAAAACTTGTGGAGAGCCTATTTTTGGGCAAGAGATATGTAGATTTTGTGTGCTGCAGGTATAATGTTGCTGTGAAATGTGCTACTATAACTCCTGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTGCTCCCTTGCTACTATTATACTCATGTCACCAGATGAAGTCTTGCACAAAGGCAATGGGACCCTCTGTGAAATGTTACTCATGGTTCAGGCATACAAAGCAAATGTTATATGTCCTAACAAACACCAATCCGACAAAGAGAAATTTTATAGCAATCATCTTCTTGAGATTCTTGCGCTTTACAGGTTTTGGTGGGGAGGATTTTGGAAGTGGCTTCAGCTTGATCAACATTTCTTGGAGCCGAGGGACTATTCTCTCTACTATTCTTTTCTTGATCATAACTGTTTCCATTCTTCTTCTCTGGAGACTCGGACTTCTCTGACAAAGAAAGCGAAGCCTCCTCTCCGATCTCAGCACCGTTTGTGGCCAATCGAAGATCCATGA 528 0.4091 MAKLVESLFLGKRYVDFVCCRYNVAVKCATITPVATYYLYTTYVHPFICSLATIILMSPDEVLHKGNGTLCEMLLMVQAYKANVICPNKHQSDKEKFYSNHLLEILALYRFWWGGFWKWLQLDQHFLEPRDYSLYYSFLDHNCFHSSSLETRTSLTKKAKPPLRSQHRLWPIEDP* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1136 175 Gene3D - 21 101 IPR036397 GO:0003676
Ahy1g1136 175 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 34 104 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Ahy1g1136 175 SUPERFAMILY Ribonuclease H-like 34 87 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1136 Ahy-Chr1 25730577 25733840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1136 34 104 Core DNA Replication Machinery Family AT1G08260 80.282 7.78e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1136 K02324 - ahf:112800974 376.326