Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1120 ATGAGACAGAATGCAATTTCAGATCATACAATTGTCCTTATGCTGGATCAGAGTGCTCTGTTGCCGGGAACATTCCTTTCCTTGTTGCACATCTGCACAGGATGCATATTCAACCACCGATATGTAAAATCAAATCCCCATGAAGTTGAGAATGCAACATGGATGCTCATGCCACGCACAACACTAGTTATGGACACGCCGGAGAGGAACCAGATCAACCCTCCCTTCTCTCGTGTCGAGGATTCCCCTGTATTCAGTTTTATCAACAGTTTGTCGCCTATAAAGCCCGTGAAGTCTGCCCAGGTTGGTCAAACATTCAGCTCGCTTAGCTTTCCTTCCCCTCCGCGTGCTTTTACTTCATCCAATCTCACCTGTTTCAAGGAATCAAAAGTTCTCAGGAGGCATAACCTTTTTGGGGCATCAAGGCCTGGGTTGTCATCTGAAGATGGTAATAAATTTCAGACAAGTGAAGAGGCTATTGCAGATTCATTTCATCCATATAATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGTAGTTGATGATTCGATTGCTCTACCTGGTGAGCACACAGACTTCTCAGCTGAGATACTACAGGCCTTAAATTATAATAATTGTGGTAACCCTGGCTCTGATCCTGGTCATGAGGCTAACTCTCTTGAAGTCTTTAATCAGGGGTTGTGTCAATTTGATCCGAAGGGCCAAGAATCAGAGTGTAATTGGGATAATTTAATCTCTGGAGATACTGATTTCTTCGTTTTCAATTCCCCAAATGACGCAGCTTTTAAGGGTATAATGCAGAAACCAGATTCTCATTTTATGTCTCTGGTACCGGAATCTTCCATATATAATGGTCTGAGAGATAGCAAACTTAAAATAGAAGATTATCGTCATGAGCCTTTAGCAATCACAGGCCAAATGCAGGACAAACACTGCGTTGCCATGACTAGCAAAATAAAGGAAAAACCAGATGTTGAGCTTGTTTCTGTGATGAACCGTGGTACACGGAGGCGATGTCTAAACTTTGAGACTGACAGTGTGCAAAGGAAGAACTCAGATGATAATTTAAAATCCGGTTCTCTTGGATATGAAAAACAATTGGTTTCGGCAAAACGCAAAAGCAGTTCACAGCAATGCACTATGCCTGCAGTTGGCTTACATTTGAATGCACCCGACAAAGAAGTCATAAGTAATGACGAGTCGTCTTGTGGAATTCATCTTAATGTTCCCAGTTGCACTTCCGTGCAAATCTATACCAGCTATGAACATCAGGAACCACTGGCAATAGGAGTGGATTCATCAAACATTGGGCCTGAGCCAGCTAAGGATAATTCTCATGCATTATATTCCACTGTTAATGATGTCAGTCAGAATAGTCCCAAAAAGAAAAGACATGGAGACTGCAAGCGTTGCAAGTGCAAGAAATCAAAGTGTTTGAAGTTACCGGCCTTTGAAATCGTCATTCAAGTTCGCAAGCAGATCGAGTCTCGCAATCCTCTGGCTTTTGCTCCTAAAGTCATTGCTGAACCTGAAATTGGGAATGATCCAAATAAAACTCCAGCACCAGCACGACACAAGAGAGGATGCAACTGTAAGCAATCAGTCTGCCTAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGCTCCTTAAGCTGTAGATGTGAAGGGTGTAAGAACACATTTGGTAGAAAGGACGGCGCTAATTCTATAGGAGTAGAAGCCCAGCTAGAAGTAGAAATAGAGGTCTGTGGAAAAGTTGTTGAAAAAGTATCACAGAGAATTGAAGTTCAGAACTCCGATAATCATCCAGATTTTGTTCCAATCTCTACGCCATTCCCGCTGTTTAGTTCATTGTCAGAGGGGAAACCAAACACTCGTTGGTCTCAACCACCTAAGCATTCTCAAGCTGTTTCGGACCAGGAAATGACAGATGTTCTTGGAGGCGGAGGCAGAAGTGATAGGTCTCCCATGACCATCAAAACTTCTTCTCCAAGTGGGAAGAGGATTTCCACTTCTAAGGGTGACTTGACACTTTCTTTTCCTTCTCCTAATCGTCATCAATAG 2082 0.4265 MRQNAISDHTIVLMLDQSALLPGTFLSLLHICTGCIFNHRYVKSNPHEVENATWMLMPRTTLVMDTPERNQINPPFSRVEDSPVFSFINSLSPIKPVKSAQVGQTFSSLSFPSPPRAFTSSNLTCFKESKVLRRHNLFGASRPGLSSEDGNKFQTSEEAIADSFHPYNNSRESQGNFHDGISVVDDSIALPGEHTDFSAEILQALNYNNCGNPGSDPGHEANSLEVFNQGLCQFDPKGQESECNWDNLISGDTDFFVFNSPNDAAFKGIMQKPDSHFMSLVPESSIYNGLRDSKLKIEDYRHEPLAITGQMQDKHCVAMTSKIKEKPDVELVSVMNRGTRRRCLNFETDSVQRKNSDDNLKSGSLGYEKQLVSAKRKSSSQQCTMPAVGLHLNAPDKEVISNDESSCGIHLNVPSCTSVQIYTSYEHQEPLAIGVDSSNIGPEPAKDNSHALYSTVNDVSQNSPKKKRHGDCKRCKCKKSKCLKLPAFEIVIQVRKQIESRNPLAFAPKVIAEPEIGNDPNKTPAPARHKRGCNCKQSVCLKKYCECFQAGVGCSLSCRCEGCKNTFGRKDGANSIGVEAQLEVEIEVCGKVVEKVSQRIEVQNSDNHPDFVPISTPFPLFSSLSEGKPNTRWSQPPKHSQAVSDQEMTDVLGGGGRSDRSPMTIKTSSPSGKRISTSKGDLTLSFPSPNRHQ* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1120 693 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 64 485 - -
Ahy1g1120 693 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 489 679 - -
Ahy1g1120 693 SMART CXC_2 528 569 IPR033467 -
Ahy1g1120 693 MobiDBLite consensus disorder prediction 625 647 - -
Ahy1g1120 693 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 531 566 IPR005172 -
Ahy1g1120 693 MobiDBLite consensus disorder prediction 661 693 - -
Ahy1g1120 693 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 64 485 IPR044522 GO:0003700
Ahy1g1120 693 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 489 679 IPR044522 GO:0003700
Ahy1g1120 693 ProSiteProfiles CRC domain profile. 471 568 IPR005172 -
Ahy1g1120 693 MobiDBLite consensus disorder prediction 625 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1120 Ahy-Chr1 24207588 24214925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1120 79 621 CPP Transcription Factor Family AT4G14770 34.622 4.94e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy1g1120 TCR 7.80E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1120 - - aip:107628213 1288.48