Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1082 ATGCCTGATTCATTCCAGACATTGAGACGTTTGGCTCAAAACAGAGAGGCCGCAAGAAAAATCCGTCTAAGGAAAAAGGTCAGGCTCAAGAGGTACATGGAAATGAGGGGTGCTGATGGGGGAACTTCAGACATGCTCTGTGCTCTGCCAGCATTTTGGGTAGGTCTGCTACATGACGAGGATTTCCTACATAATGCTCTAGATATCATTGTTCATTGGACCCCCGAGGAGAGACAGAATTTAAGGAACATGGCAAGAAGCTGCTGGTGCCCTTTGGAATTTGTCATTTGA 291 0.4639 MPDSFQTLRRLAQNREAARKIRLRKKVRLKRYMEMRGADGGTSDMLCALPAFWVGLLHDEDFLHNALDIIVHWTPEERQNLRNMARSCWCPLEFVI* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1082 96 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 9 24 IPR004827 GO:0003700|GO:0006355
Ahy1g1082 96 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 24 84 IPR035434 GO:0004357|GO:0006750
Ahy1g1082 96 Gene3D - 11 90 - -
Ahy1g1082 96 Pfam Glutamate-cysteine ligase family 2(GCS2) 26 73 IPR006336 GO:0004357|GO:0042398
Ahy1g1082 96 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 24 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1082 Ahy-Chr1 21473037 21477372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1082 6 36 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.516 4.01e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1082 K01919 - ahf:112800493 165.236