Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1070 ATGGGCACCATCACATCCATTAACGCCTTGCTCTTATTCATGCTATCTACTTTCTTGCTTTTTTACTTCCCATATTTCGCCATCGGCAAAGATGAGGCCGGGCGGCAAAGACAAGCATTGGAGATTATCATAGGACCAGGCGGCCCTGGTTATTATTATCCTGGCCCTGCTCCTTCACCCGAATGTCCCCCTCCTCTTCCTCCTCTTCCTCCTCCTCCCAAACCGGCATGTCCCCCTCCTCTTCCTCCACCACCGCCACCACCACCACCACCACCTCCTCCTCCTCCACCTCCACCTCCACCACCAGCAGCGTGTCCCACATCATCTCCTCCTCCGCCGCTGCCTCCACTTCCGACGTGTCCCCCTCCATTACCACCACCACCACCACCACCTCCACCACCTACTTGTCCCCCTCCATCACCGCCGCCGCGTCCTCCTCCGCCACCACCACCACCACCACCTCCTCGTCCTCCTCCACAGACACGGTTGATAAGAGCACGAGGAGTACTTCTAAAATTCAAGAAATTTGAAATCGTTGACAAAACAGGGTACACTAATAACTGGAAAGGCTCAAATCCATGCAAGTACAATGGGATAAGGTGCGCCACATATCCAAACTCAAAGGAGACAGCTGTGGCCGGAATAGACCTCAACCAAGCCCAGATCACCGGTGTTAAAAACGGAACATTGAAGCTTTCCGATGTCTTGGGCGAAATTCCAGAGCTCACATTCTTCCACGTTAACTCTAACGGCTTCGGCGGCAACCTCCCAGACTTATCCGTTAAAAAGTTCAAGTATTTCTACGAACTTGACCTCAGCAACAACAAGCTCTCAGGTGCGTTCCCAATGCAAGTTCTTCAGGCTACGAATCTAACATTCCTGGACATTAGGTTCAACCAACTCTCCGGCCCAATTCCACCGGAACTCTTCGTCCAAGATCTCGATGTTATCTTCATCAACAACAACTTCTTCTCCGGCAACCTCCCTAGTAATTTCGGCTCAACTCCTGCCAGGTACCTCACGTTCGCCAACAATCAATTTAGCGGCACGATCCCAAGCAGCATTGGTAAAGCTTCGAAGACGCTAACCGAAGTGCTGTTCTTGGGGAACAACCTTGACGGATGCCTGCCCTACGAGATAGGCTTGCTCGGCAAGGCGACAGTCTTTGATGCGAGCAAGAACATCATTACGGGTCCCATTCCTCACTCTTTCGGATGTTTAAAAAGCATTCAGTTCCTCAACCTTGCAAGCAACCAGCTGTACGGTGCAGTTCCGGAGATCGTCTGCATTCTCCCGGGGCTCCGCAACAACGGCAACTTGTCGTTGTCGGACAACTACTTTACCCAAGTTGGTCCTGAGTGCTTGAAGCTGATAGAGAACAAGGTTCTTGACGTCAACAATAACTGCATCTTGGGGCTTCCTAATCAAAGATCACCGGAAGAATGCCACGCATTCTTTTCCAATGTGAAACCATGCTCTAACCCCAAATTTTTCCATTACATCCCTTGCAAAACGTACTACTCGCAGTTACACTCCCAAGCCGCAGCGGCGCAGCTGCTTCAAGAAGATAGTTCTTTCTATTCTTCACCGCCTGAGCCGGTAACCTATAAGACTCTCAGACCTCATCGCTTATGA 1635 0.5095 MGTITSINALLLFMLSTFLLFYFPYFAIGKDEAGRQRQALEIIIGPGGPGYYYPGPAPSPECPPPLPPLPPPPKPACPPPLPPPPPPPPPPPPPPPPPPPPPAACPTSSPPPPLPPLPTCPPPLPPPPPPPPPPTCPPPSPPPRPPPPPPPPPPPRPPPQTRLIRARGVLLKFKKFEIVDKTGYTNNWKGSNPCKYNGIRCATYPNSKETAVAGIDLNQAQITGVKNGTLKLSDVLGEIPELTFFHVNSNGFGGNLPDLSVKKFKYFYELDLSNNKLSGAFPMQVLQATNLTFLDIRFNQLSGPIPPELFVQDLDVIFINNNFFSGNLPSNFGSTPARYLTFANNQFSGTIPSSIGKASKTLTEVLFLGNNLDGCLPYEIGLLGKATVFDASKNIITGPIPHSFGCLKSIQFLNLASNQLYGAVPEIVCILPGLRNNGNLSLSDNYFTQVGPECLKLIENKVLDVNNNCILGLPNQRSPEECHAFFSNVKPCSNPKFFHYIPCKTYYSQLHSQAAAAQLLQEDSSFYSSPPEPVTYKTLRPHRL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1070 544 SUPERFAMILY Formin homology 2 domain (FH2 domain) 145 155 - -
Ahy1g1070 544 Gene3D Ribonuclease Inhibitor 165 337 IPR032675 -
Ahy1g1070 544 PRINTS Proline rich extensin signature 63 79 - -
Ahy1g1070 544 PRINTS Proline rich extensin signature 83 95 - -
Ahy1g1070 544 PRINTS Proline rich extensin signature 48 60 - -
Ahy1g1070 544 PRINTS Proline rich extensin signature 95 116 - -
Ahy1g1070 544 Pfam Leucine rich repeat N-terminal domain 169 201 IPR013210 -
Ahy1g1070 544 Gene3D Ribonuclease Inhibitor 338 494 IPR032675 -
Ahy1g1070 544 MobiDBLite consensus disorder prediction 62 117 - -
Ahy1g1070 544 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 538 - -
Ahy1g1070 544 SUPERFAMILY L domain-like 184 473 - -
Ahy1g1070 544 MobiDBLite consensus disorder prediction 129 161 - -
Ahy1g1070 544 PANTHER BNAC05G26270D PROTEIN 17 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1070 Ahy-Chr1 21059054 21061392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1070 162 487 Leucine-rich Repeat extension Gene Families AT4G13340 45.260 4.86e-81 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1070 - - ahf:112800345 783.097