Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1044 ATGACAGAAACTACAATTCTACCTGTTGGATATAGGTTTCGTCCAACAGAAGAACTTTTAGTTCACTATCTCAATAACAAGCATTTGAGAAATGATGCACAGATCAAGAACACTGTTTCCCAAATTGATCTTTATAACTTTGATCCTTGGGATTTGCCAGAACAATCGAAGGTGAAATGGGATGATCAAGAATGGTTTTTCTTCAATGAATTGAAACACATAAAAAACAAGCGGTGTAACAGAAAAACTAACGCCGGTTATTGGAAGATCACCGGAAAAGAGCGGATCGTCAAAAGAACAGGGATAGACAATATCAACATCGTGTTGAGCCGTGTAATAAAGAATGTTGAGAAAAGGGAAAAGAAGGTTAAGAGAAAAGCAAGCAACATAATCGAAGAGGAAGCATGTGTTTCATCCGAACCGCAAGCACCTCAAGATGTTGACTATGAAATTCTTTCGTCGGAACAACAATCTTCGGTGGCCCATTCCGGTAATGGAAGCAACAATTCTCCGTTGCTTCCATTTGAATGTATGTGGAAGCAAGATGTCGAGATGAACACGGAGTGTTTTTGGAATTTGCTGTTTTCTAGCATCGATGCTGACCTTGATGCGGAGTTCTTGAATTCGGTGTTGGCAGGGAATGATTAA 648 0.3966 MTETTILPVGYRFRPTEELLVHYLNNKHLRNDAQIKNTVSQIDLYNFDPWDLPEQSKVKWDDQEWFFFNELKHIKNKRCNRKTNAGYWKITGKERIVKRTGIDNINIVLSRVIKNVEKREKKVKRKASNIIEEEACVSSEPQAPQDVDYEILSSEQQSSVAHSGNGSNNSPLLPFECMWKQDVEMNTECFWNLLFSSIDADLDAEFLNSVLAGND* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1044 215 SUPERFAMILY NAC domain 4 101 IPR036093 GO:0003677|GO:0006355
Ahy1g1044 215 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 9 103 - -
Ahy1g1044 215 Pfam No apical meristem (NAM) protein 8 119 IPR003441 GO:0003677|GO:0006355
Ahy1g1044 215 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 103 - -
Ahy1g1044 215 Coils Coil 113 133 - -
Ahy1g1044 215 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Ahy1g1044 215 ProSiteProfiles NAC domain profile. 7 154 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1044 Ahy-Chr1 19572033 19575284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1044 7 98 NAC Transcription Factor Family AT1G33060 49.474 3.60e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy1g1044 NAM 6.00E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1044 - - ahf:112702353 430.254