Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1029 ATGCTTTTTGACCCTTTCATATATCATGGGATGGCTGAACTGCATGACAGGCACAGAGAAATGCGCCTTGGTGTTGATAACACGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCGAGGATGTCATTATGAAGTCAATGAAACAGCAAATATACATGTCTGTTATGGTGGATTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGGTAAGAGTTATGGTCTCAGCTAATTAA 264 0.4167 MLFDPFIYHGMAELHDRHREMRLGVDNTSYEELLALEERIGDVSTGLSEDVIMKSMKQQIYMSVMVDSSTDLEPCCICQVRVMVSAN* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1029 87 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 80 - -
Ahy1g1029 87 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 80 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1029 Ahy-Chr1 19114525 19114955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1029 1 79 C3H Transcription Factor Family AT2G15530 67.073 5.55e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1029 - K19041 ahf:112742058 177.563