Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1001 ATGGAATCAATTCCTTACACGATCCCTTCTTCTAAGCTCCAATCACTAATTTTTTACAAAACACCCACCAGAACTCGATCCTCCAAGCTCCTCCCTCTTCACCCTCCCCCACTTCCAATCAAACCCTTCTATTATTCACCTAAATGCCTCCCTCTCCGTTACCATCGCCTCCGCTGCCTCGCTCACTCCAACGCTAACCACCACCATCACAGCCACAGCGATCATAACCACCACGAGCACGACCATCACCATCACCACCACCACCACCACCACCACGCGCATCATGCCATCGACAGCGCTAACCTCACGGGACCACAACGAGCGATCATCGGGTTCGCGAAAGCCACGAGGTGGATGGACTTGGCCGATTTCTTAAGGGAGCACTTGCATCTTTGCTGCTTCTCAACAGCTTTATTCGTGGCAGCTGCCATTTGCCCTCACACTTTGCCAAAGCCTCTCGTTAAGCGCTTCCAACACTCCCTCATCATCCTTGGATTTCCTTTGGTTGGGGTTTCGGCTTCGCTGGATGCTCTAATTGAACTTAGCAGTGGAAAAGTGAACATCCATGTACTAATGGCGATGGCTGCTTTTGCGTCTGTTTTTATGGGAAACTCTTTGGAAGGAGGGTTGCTTCTTGCCATGTTCAATCTCGCGCATATAGCTGAGGAGTACTTCACTGGACGGTCGATGATCGATGTTAAAGAGTTGAAAGAGAATCATCCTGAGTTTGCACTTGTTCTTGACACCAGTGGTGATAAGCTTCCTAATACATTCAACTTGGCGTACAAGAGTGTTCCTGTGCATGATGTAACTGTAGGATCATATATCCTTGTTGGTGCTGGTGAGTCTGTGCCTGTAGATTGCGAAGTTTTCCAAGGCAACGCTACAATTACCATCGAGCACTTGACAGGGGAAATCAAACCATTGGAGGCCAAAATTGGAGACAGGATACCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATTGTAAAGGTAACAAAGACATGGAACGAATCAACCCTAAACCGAATTGTGCAATTGACTGAAGAAGCACAGTTGAATAAACCAAAACTTCAAAGATGGTTGGACGAATTTGGTGAACGTTACAGCAAAGTAGTTGTGGTATTATCAGTTGCAATTGCCGTTATTGGGCCAATTTTATTTAAGTGGCCTTTCATTAGCACACCAGCATGCAGAGGTTCAGTTTACAGAGCCCTAGGGCTCATGGTTGCAGCATCTCCATGTGCTTTGGCTGTGGCCCCATTAGCATATGCAACAGCAATTAGTTCCTGCGCAAGAAAGGGGATATTACTCAAAGGTGGACATGTGTTAGATGCTCTAGCTTCTTGTCATACTATTGCATTTGATAAAACAGGAACATTAACCACAGGAGGACTTCTATTCAAGGCAATTGAGCCCATTTATGGTCATAATGTCAGAAAGAATGAGTCAAACATTTCTTCCTGTTGCATCCCTACCTGTGAGAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCATCCCATTGGAAGGGCTGTTGTTGACCATAGCGAAGGCAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTACTTCCCTGGAAGGGGCCTTATTGCTACTGTTAACAGCATTGAGTCAGGAACTGGAAGTGCTAAGCTATTGAAAGCATCACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCATTCTGAAGAGGAGTCAGAAAAGATCAAGGAAGCTGTTAATACATCTTCGTATGGAAGTGAATTTGTTCATGCTGCTCTTTCGGTTAATAAGAAGGTGACACTTATTCACCTAGAAGATAGGCCTCGTCCTGGGGTTTTTAATGTTATTCAAGAATTGCAGAATGAAGCAATGTTACGGGTGATAATGTTAACTGGTGATCATGAGTGTAGTGCAAGGAGGGTTGCAAATGCTGTGGGCATCAGTGAGTTTCATTGCAACCTGAAACCTGAAGATAAACTGAGTCATGTAAAAGACACATCAAGAGATACAGGAGGAGGCTTAATTATGGTTGGTGAAGGAATCAATGATGCCCCTGCACTTGCTGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCTGATGTGTTATTGCTTCGTGAAAATATTTCTGCAGTACCATTTTGTATCGCCAAGTCTCGCCAAACAACAACACTGATTAAACAAAATGTGGCTCTGGCATTGTTCTGCATTACCATGGCTTCTCTTCCATCAGTTTTGGGATTTCTGCCCTTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTTTGTCTCAATTCTATTCGTGCCTTAAACGAACCATCTTGGTCATGGAAGCAGGATTTGTTACATTTGATTGGCGAGGTTAAATCTAGGCTTCTTTCTCTTGGGACAAATATTAAGGGCTCAAGCAACATTACAACGGCGAGTTTATAA 2487 0.4459 MESIPYTIPSSKLQSLIFYKTPTRTRSSKLLPLHPPPLPIKPFYYSPKCLPLRYHRLRCLAHSNANHHHHSHSDHNHHEHDHHHHHHHHHHHAHHAIDSANLTGPQRAIIGFAKATRWMDLADFLREHLHLCCFSTALFVAAAICPHTLPKPLVKRFQHSLIILGFPLVGVSASLDALIELSSGKVNIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTGRSMIDVKELKENHPEFALVLDTSGDKLPNTFNLAYKSVPVHDVTVGSYILVGAGESVPVDCEVFQGNATITIEHLTGEIKPLEAKIGDRIPGGARNLDGRIIVKVTKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIAVIGPILFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLLFKAIEPIYGHNVRKNESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLIATVNSIESGTGSAKLLKASLGSVDFITSFCHSEEESEKIKEAVNTSSYGSEFVHAALSVNKKVTLIHLEDRPRPGVFNVIQELQNEAMLRVIMLTGDHECSARRVANAVGISEFHCNLKPEDKLSHVKDTSRDTGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTTLIKQNVALALFCITMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPSWSWKQDLLHLIGEVKSRLLSLGTNIKGSSNITTASL* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1001 828 Gene3D - 228 352 - -
Ahy1g1001 828 SUPERFAMILY HAD-like 452 784 IPR036412 -
Ahy1g1001 828 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 64 816 - -
Ahy1g1001 828 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 188 786 IPR027256 GO:0006812|GO:0016021|GO:0019829
Ahy1g1001 828 SUPERFAMILY Calcium ATPase, transmembrane domain M 190 757 IPR023298 -
Ahy1g1001 828 PRINTS P-type cation-transporting ATPase superfamily signature 708 720 - -
Ahy1g1001 828 PRINTS P-type cation-transporting ATPase superfamily signature 607 618 - -
Ahy1g1001 828 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Ahy1g1001 828 PRINTS P-type cation-transporting ATPase superfamily signature 684 703 - -
Ahy1g1001 828 PRINTS P-type cation-transporting ATPase superfamily signature 630 640 - -
Ahy1g1001 828 CDD P-type_ATPase_HM 132 786 - -
Ahy1g1001 828 MobiDBLite consensus disorder prediction 65 97 - -
Ahy1g1001 828 Gene3D - 465 615 IPR023299 GO:0000166
Ahy1g1001 828 Gene3D - 447 735 IPR023214 -
Ahy1g1001 828 SFLD C1.7: P-type atpase like 436 737 - -
Ahy1g1001 828 Pfam E1-E2 ATPase 262 434 - -
Ahy1g1001 828 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 581 764 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1001 828 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 262 475 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1001 828 MobiDBLite consensus disorder prediction 65 95 - -
Ahy1g1001 828 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Ahy1g1001 828 SUPERFAMILY Calcium ATPase, transduction domain A 262 347 IPR008250 -
Ahy1g1001 828 Pfam haloacid dehalogenase-like hydrolase 452 697 - -
Ahy1g1001 828 SFLD p-type atpase 436 737 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1001 Ahy-Chr1 17416816 17426494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1001 88 809 Primary Pumps ATPases AT4G37270 75.069 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1001 K01534 - gmx:100776309 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1002 11 22179570 22189284 Ahy1g1001 1 17416816 17426494 hybridization