Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0929 ATGGTGGATAGGATGGTGAAGAAGGAGGTTGAACAACATGATGAACAAACTGTGACTCTGGGTTTCTATGGAGACGAGCAAGCTCAACGGAGGTTTTCTATAAACATGATGGATAAACAAAACAAGGCCACGGATAACAAAAACAAGGTCTTAAACTCTGATATAAAGCCTGTCACAAATGGCGAGGCACAAAAATTTGCAAGCTCTATGAAGGCTACAACAGCAGAAGCAACATCCTCTCGTGGTGAGGCTAAGTCATCTGCTGTAATTCGAGCAGAAGAGATCCGATCGAGTTTGCAAGGCGAATACCCGAGTTTTGTGAAGTCATTAGTGAGATCACATGTTGCTAGTTGTTTCTGGATGGGTCTGCCTGTGGCATTCTGTAAGAAGCACTTGGCAGATAAGGATACAACGATGACTTTGGAAGATGAATATGGCAAAGAATACAAGATGAAGTACATCGCATGCAAAACGGGATTGAGCGCAGGTTGGAGACAGTTTTCTGCTGTGCATAAGTTGCAGGAGGGTGACGTCTTGGTCTTCCAGTTAGTTGAACCTGCCAAGTTTAAGATTTATATAGTAAGAGCAGATAATTTAAGGGAAGTAGATGGGGCCCTTTCGCTCATGAATCTAGACAGTTATGCAAGACAAAAGCAGAGAGGCAAGCCTTGTTTTGTTTCTCCATGCTTTGGCTTCTTACATTGTATAAAGAGTTTTCACTTTTAA 726 0.4229 MVDRMVKKEVEQHDEQTVTLGFYGDEQAQRRFSINMMDKQNKATDNKNKVLNSDIKPVTNGEAQKFASSMKATTAEATSSRGEAKSSAVIRAEEIRSSLQGEYPSFVKSLVRSHVASCFWMGLPVAFCKKHLADKDTTMTLEDEYGKEYKMKYIACKTGLSAGWRQFSAVHKLQEGDVLVFQLVEPAKFKIYIVRADNLREVDGALSLMNLDSYARQKQRGKPCFVSPCFGFLHCIKSFHF* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0929 241 MobiDBLite consensus disorder prediction 66 87 - -
Ahy1g0929 241 Gene3D - 82 199 IPR015300 -
Ahy1g0929 241 SUPERFAMILY DNA-binding pseudobarrel domain 99 197 IPR015300 -
Ahy1g0929 241 Pfam B3 DNA binding domain 106 195 IPR003340 GO:0003677
Ahy1g0929 241 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 27 214 IPR044837 -
Ahy1g0929 241 CDD B3_DNA 104 195 IPR003340 GO:0003677
Ahy1g0929 241 ProSiteProfiles B3 DNA-binding domain profile. 106 197 IPR003340 GO:0003677
Ahy1g0929 241 SMART B3_2 106 197 IPR003340 GO:0003677
Ahy1g0929 241 MobiDBLite consensus disorder prediction 66 85 - -
Ahy1g0929 241 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0234100-LIKE 27 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0929 Ahy-Chr1 14011740 14014192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0929 83 201 B3 DNA Binding Superfamily AT5G42700 48.739 2.63e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy1g0929 B3 1.70E-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0929 - - ahf:112798347 486.493