Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0913 ATGGCCTTCAGCGTTGTGTACTTGTGCAAGTACTGCTTTGTAAGCGTCCTCCACTCTTGGGCCTTCCACCAGAGTTTCTCTGGTTCATTGCTTCGTCCTTCATCAACAAATAGGTCTTCCTCAATAGGCCTTGATCCTTCCATGCTTCAAACGTTCCCAACCTTTGTGTATTCCTCCGTAAAGGACCTCCGCAGCCTAGAATGTGCCATTTGCTTGCTCGAATTCCAGGACGACAGCTTGATTCGCCTCTTGACTATTTGCTGCCATGTTTTCCACCAAGAATGCATTGACCTTTGGCTTTATTCCCACAAGACTTGCCCTGTTTGCCGCACAAACCTCGAGGAGCATAAATCAGGAGAAGGAGAAATCAGTGGTAGCAGTGGTGGTGCTGACATACGCATTGACATAATAACAGACATGGCCACCCAAGGTAGTGGGGGTCATCAGGGTACAGGAGGAGAGGATCATTCGTGTAATGACGAACATGATCATAATAATAATGGGGTGCAGCAAGAACACAAGTTTGCAAGGTCACACTCAACGGGCCATTCCATAGTTTTTAGAGGAGAAGAAGAAGAAAAAGATGATAAATATACCTTGAGGCTGCCTCGACACATTATAAGAGGGCGGCACCACTATTCTAAGAGTTGTACAAGTTTTCAAGAGATGCAGATGACGACTTCGACTAGGCCTTGTAGTAATTGCGGCTTTGTTGAATCTGTATCTAGCTGCTCCACCTCTCTCGCTCATATCCAAATTTCTTGA 765 0.4588 MAFSVVYLCKYCFVSVLHSWAFHQSFSGSLLRPSSTNRSSSIGLDPSMLQTFPTFVYSSVKDLRSLECAICLLEFQDDSLIRLLTICCHVFHQECIDLWLYSHKTCPVCRTNLEEHKSGEGEISGSSGGADIRIDIITDMATQGSGGHQGTGGEDHSCNDEHDHNNNGVQQEHKFARSHSTGHSIVFRGEEEEKDDKYTLRLPRHIIRGRHHYSKSCTSFQEMQMTTSTRPCSNCGFVESVSSCSTSLAHIQIS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0913 254 PANTHER RING-H2 FINGER PROTEIN ATL29 2 223 - -
Ahy1g0913 254 MobiDBLite consensus disorder prediction 143 167 - -
Ahy1g0913 254 ProSiteProfiles Zinc finger RING-type profile. 68 110 IPR001841 -
Ahy1g0913 254 PANTHER RING FINGER DOMAIN-CONTAINING 2 223 - -
Ahy1g0913 254 SMART ring_2 68 109 IPR001841 -
Ahy1g0913 254 Pfam Ring finger domain 67 110 IPR001841 -
Ahy1g0913 254 CDD RING-H2_EL5_like 67 110 - -
Ahy1g0913 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 116 IPR013083 -
Ahy1g0913 254 SUPERFAMILY RING/U-box 49 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0913 Ahy-Chr1 13412503 13413267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0913 32 206 Rapid Response to Elicitors AT3G05200 41.758 1.75e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0913 - - ahf:112732715 506.908