Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0896 ATGGCGGATGGTGATGATGATGGGGGTGGTGGTTTTTTATTCAATAGCAATGTTAGTTCCGTGCTAGCTGGCATGGGTTCAGCTGTGATTGTGCTGCTAATATACCGATGCATGTCCATGTTCTTGTGCATCCGCCATCCTCTCACAACCGAACAAGAGCAGGCTCGGTCCCCGCCGGCCGGCACCCAATCTAGTACTTTGAATTCGGTGGCGCATATGATCCCATCCCACAAGTACGACAAGAAAGATGATGATTGCACAACATGTGCAGTGTGCTTGGGAGAGTTCGAGGAGGGTGATGAGTTGAGGAGGATGCCAGAGTGCATGCACTCTTTCCATGTCCCATGCATTGATATGTGGCTCCGTTCCCATTCAACTTGTCCTATTTGCCGTGCTCATGCCACACCCTCTTCTAACCATCACTTCAATCACACCACCATTGATATGGATTTCATGCAACGTATTCTTCTCCAAGGTGGCCATGCTCCCGTGCCCATGTAG 501 0.501 MADGDDDGGGGFLFNSNVSSVLAGMGSAVIVLLIYRCMSMFLCIRHPLTTEQEQARSPPAGTQSSTLNSVAHMIPSHKYDKKDDDCTTCAVCLGEFEEGDELRRMPECMHSFHVPCIDMWLRSHSTCPICRAHATPSSNHHFNHTTIDMDFMQRILLQGGHAPVPM* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0896 166 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 152 IPR044675 -
Ahy1g0896 166 SMART ring_2 89 130 IPR001841 -
Ahy1g0896 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 137 IPR013083 -
Ahy1g0896 166 Pfam Ring finger domain 88 131 IPR001841 -
Ahy1g0896 166 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Ahy1g0896 166 SUPERFAMILY RING/U-box 80 137 - -
Ahy1g0896 166 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 4 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0896 Ahy-Chr1 13247587 13248087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0896 21 139 C3H Transcription Factor Family AT5G17600 36.842 1.49e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0896 - - ahf:112782505 320.472