Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0890 ATGGAGATATCAAGAATTTGGCAATGGTTAAATCTTCTAGTATGTGTACTGTTATTAATAAAGTCAGAAGGATCTGGTTTTGTTCCAATAACTTATTTGGAGGATGCAGAGTCAAAAGGAGCCGTTTGTTTGGATGGTAGTCCTCCGGCATACCACTTCGATAAGGGATCCGGTGAAGGTGTTAACAGCTGGATTGTTCATCTTGAGGGAGGAGGATGGTGCAGTGATGTGTCTTCTTGCCTTGAACGCAAGGACACTCGCTTAGGTTCATCCAAACAAATGGATACTCAGGCTGGATTTTATGGAATACTTAACAACCAACAAGATTATAATCCAGATTTCTACAACTGGAACAGAATCAAGATTAGGTACTGTGATGGATCATCATTTACTGGTGATGTGGAAGAAGTTGATCCAACAAACAATCTGCACTTCAGAGGAGCAAGAATTTTTGAAGCAGTCATTAAGCATTTACTTGCAAAAGGAATGGAGAATGCTGAAAAGGCTATTCTGTCTGGATGCTCTGCTGGAGGATTGGCTGCTATATTGAACTGTGATCGCTTCAAATCCTTCCTACCAAATGGCGCTAGAGTGAAATGCGTGCCAGATGCCGGCTATTTTATCCATCTACCAGATGTCTCCGGAACAAAGCGCATTGAAAATTTCTACAAAGGAGTTGTTGAAACACATGGATCAGCAAAGTATTTGTCTAAATCCTGCACTTCAAAATATGGAGCTGGCCTGTGCTTTTTCCCACAATATGTAGTACAAGATATCGCCACGCCCATTTTCGTCGTAAATGCGGCCTATGACTCATGGCAGATTAGAAACATTTTGATACCGGGCATGGCGGATCCACACGGCAGCTGGCAAAACTGCAGAGATGACATAAGCAATTGCACACCTGATCAACTAGATGCTGTGCAAGGGTTTAGAGAGGATTTCATAAAGGCATTGAGTGGGGTGCAGAACTCTCCATCAAAAGGAATGTTCATAGATTCTTGCTACATCCACTGCCAAACGGAAATGCAAGAGTCTTGGTTCAAAACCGATGCACCTCAGCTTGCAAATACTACTATTGCTAAGGCTGTTGGTGACTGGTTTTATGATCGAAAGCCTTTTCAACACATTGATTGTGCCTTCCCATGCAACCCTACTTGTGGTAAACCCGTCTTAAATGTCAAAGTCAACCCTGAATTCTAG 1203 0.4239 MEISRIWQWLNLLVCVLLLIKSEGSGFVPITYLEDAESKGAVCLDGSPPAYHFDKGSGEGVNSWIVHLEGGGWCSDVSSCLERKDTRLGSSKQMDTQAGFYGILNNQQDYNPDFYNWNRIKIRYCDGSSFTGDVEEVDPTNNLHFRGARIFEAVIKHLLAKGMENAEKAILSGCSAGGLAAILNCDRFKSFLPNGARVKCVPDAGYFIHLPDVSGTKRIENFYKGVVETHGSAKYLSKSCTSKYGAGLCFFPQYVVQDIATPIFVVNAAYDSWQIRNILIPGMADPHGSWQNCRDDISNCTPDQLDAVQGFREDFIKALSGVQNSPSKGMFIDSCYIHCQTEMQESWFKTDAPQLANTTIAKAVGDWFYDRKPFQHIDCAFPCNPTCGKPVLNVKVNPEF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0890 400 PANTHER NOTUM-RELATED 4 394 IPR004963 GO:0016787
Ahy1g0890 400 Pfam Pectinacetylesterase 26 373 IPR004963 GO:0016787
Ahy1g0890 400 SUPERFAMILY alpha/beta-Hydrolases 142 298 IPR029058 -
Ahy1g0890 400 PANTHER PECTIN ACETYLESTERASE 4 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0890 Ahy-Chr1 13126709 13130337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0890 5 392 Carbohydrate Esterase AT4G19420 55.083 4.05e-179 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0890 K19882 - gmx:100776802 591.652