Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0878 ATGGGGTGGGGCAACACTAACAACAATGAGATATGGAAGGCCCATGGGGCCATGGCCATGGTTCAGCTATTCAGCGGTGGCTATCACGTAATTACCAAATTAGCCCTCAACGTTGGCGTCAACCAGATCGTCTTCTGCGTCTTCCGCGATCTCCTCGCCCTCTCCATCCTCGCCCCTCTCGCCTTCTTCCGTGAAAGACGCACGCGCCCTCCCCTCACCAAGCACCTCCTCTTCTCCTTCTTCTTTCTTGGATTAACCGGGATATTTGGGAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCAATACAGCCAGCCACTCCGGTTTTTACATTTCTCTTCGCTGTAATCATGGGCACAGAAAGAGTGAATTTGCTAAGATATGAGGGTTTGGCCAAGCTTGGTGGAACTCTTGTCTGTGTTTTTGGTGCTATTTTGATGGTTTTGTACCGGGGTCCGGCTGTCGTAGGCTATGCCGAAATGGACTTTGTTTCGCATAATGAAATCAGTGCTAAAGGTCAACCAGAGCCTTCTGGATGGTTGGTTACTGGTTTAATGGATCTTGGACTCGACCATTTTCATCTTGGGGTTCTGTGTTTCATAGGGAACACCTTGTGCATGGCTGCTTTTCTTGCCATTCAGGCACCAATACTAAAAAAATATCCTGCAAACTTATCTGTCATTGCATTTTCATACTTCTTCGGAGCTCTACTAATGGTGATCACATCAATGTTCGTGACAAATGAGGCGACCGACTGGATTTTGACGCAGTCCGAGACACTTGCTGTTATTTATGCTGGTGTTATCGCATCTGCCCTTAACTATGGACTGATTACATGGTGCAACAAGATATTAGGGCCAGCAATGGTTGCTCTTTATAATCCACTTCAACCTGGTGCTTCTGCTCTCTTGTCTAGAATTTTCCTTGGAAGTCCAATTTACATGGGAAGCATTCTTGGAGGTTCTTTGATTATTACTGGTTTGTATGCTGTTACATGGGCATCATTTAGAGAAAGACAAGCATCAAGTGGAGTTCTTCCTCATCATCATCATCATCATCATCATGGATCTTGGGTCTCTGATGACAAGAGTTCATATCAGAGAGGTCTCATCCTCCCCAGCTTAACCCCAAAGCCTTCTGATTAA 1167 0.4524 MGWGNTNNNEIWKAHGAMAMVQLFSGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPLAFFRERRTRPPLTKHLLFSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLFAVIMGTERVNLLRYEGLAKLGGTLVCVFGAILMVLYRGPAVVGYAEMDFVSHNEISAKGQPEPSGWLVTGLMDLGLDHFHLGVLCFIGNTLCMAAFLAIQAPILKKYPANLSVIAFSYFFGALLMVITSMFVTNEATDWILTQSETLAVIYAGVIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSILGGSLIITGLYAVTWASFRERQASSGVLPHHHHHHHHGSWVSDDKSSYQRGLILPSLTPKPSD* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0878 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 345 - -
Ahy1g0878 388 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020|GO:0016021
Ahy1g0878 388 Pfam EamA-like transporter family 20 138 IPR000620 GO:0016020|GO:0016021
Ahy1g0878 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Ahy1g0878 388 PANTHER WAT1-RELATED PROTEIN 12 382 - -
Ahy1g0878 388 PANTHER WAT1-RELATED PROTEIN 12 382 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0878 Ahy-Chr1 12886172 12888809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0878 97 350 Nodulin-like Gene Family AT5G45370 66.535 2.11e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0878 - - gmx:100809051 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0268 5 3104931 3108009 Ahy1g0878 1 12886172 12888809 PCT
Ahy1g0878 1 12886172 12888809 Ahy5g0268 5 3104931 3108009 PCT