Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0846 ATGCTCTCAGCACATATATGTCAGCTTCTGTTTATTGAACCAAACTTCAGTGTTGGCAAAATTGTGAAAATCGCCGTAGAAGCCGCAGTTAAAGATGTAAATTCTGATCCATCAATTCTTGGCAAAACTCAGCTCAAGCTCTCACTTCAAGAAGATTCCAAATATAGAGGATTCTTGAGCATTGCTGAGGCATTGCAGCTCATGGCAACACACACTGTGGCCATAATTGGCCCACAGACCTCCACAACAGCTCATGTCATATCTCACATTGCGAACGAGCTTCGAGTTCCCCTGCTGTCGTTTACAGCCACTGACCCCACCCTTTCTTCGCTTCAGTTCCCATTCTTCATTCGGACATCTTTTAATGATATGTATCAGATGACTGCAATAGCAGATCTTGTTAACTACTATGGTTGGAGGGAGGTTATTGCAGTCTATGGTGATGATGATCATGGGAGGAATGGAATTGGTGCCTTAGGGGACAAGCTAGCTGAGAGGCGCTGCAAGATCTCGTTTAAAGCTCCTATGAGTCCTGAGGCAACCAGGGAGGAGATCACTGATGTGCTTGTTCAGGTAGCTCTGGCTGAATCGCGGGTTATAGTCCTTCACACAAGTACTACTTGGGGGCCAAAAGTGCTAAATGTGGCGAAATCTCTTGGAATGATGGAAAATGGTTATGTCTGGATAGCCACAACTTTTCTGTCTACCGGGATAGATATAAGTTCTCCACTTTCTTTGAGTGTAATGGATGACATTCAAGGAGTTATTGCGCTACGAATGTATGTGCCGGATTCAAAGCTTAAGAGATCTTTCATTTCGAGGTGGAAAAACTGGACTAATGGCTCCCTTGGATTGAGTACTTATGCTATCTTTGCATATGATACTGTCTATGTTCTTGCTCATGCGCTTGCTGCATTTTTTAAACAAGGGAACCGAATCACCTTTTCATCTGATTCAAAGACATCTCTAATACATGGTGACAACATGCATCTTGATGCTGTCAAGATATTCAACGAAGGAAAACTGCTGCGAAAAAGTATCTACGAGGTTAACATGACCGGTGTAACAGGTCACTTCAAGTATACATCTGATGGAAACCTTGCAAATCCGGCATATGAAATCATCAATGTGGTTGGAACAGGGACTAAGAGGATTGGTTATTGGTCTAATCACTCTGGACTATCATCTGTAAGTCCTGAAGAACTTCATTCAAAGCCGGCTAGTCATTCAAGTTCAAGTCAAAAGCTACTATCTGTGATTTGGCCAGGGGACACAACACAGAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGATGCTAAAAATTGGAGTTCCAAAAAGGATCAGTTACCGCGAATTCGTCTCACAAGTAAAAGGCACTGATATGTTCAAGGGGTTCTGCATTGATGTCTTTCTTTCTGCAGTGAACTTGTTGCCTTATGCTGTCCCCTATAAGTTTATTTCGTACGGAGACGGTCACAGCAATCCTAGTAACACTGAACTTGTCCGTCTGATCACCACCGGTGTGTTTGATGCTGCTGTAGGTGATATTACAATTACCACAGAAAGAACAAAGATGGTGGATTTTACGCAGCCATTCATCGAGTCCGGTCTAGTGGTAGTAGCATCAGTGAAGAAGACAGACTCAAATGCTTGGGCATTCTTGATGCCATTTACTCCAATGATGTGGACTGTCACAGCTATCTTCTTCCTAGTTGTTGGTGCTGTTGTCTGGATTTTAGAGCATAGGCTCAATGATGATTTTAGGGGACCTCCCAAAAAACAAGTAGCCACAATTTTGTGGTTCAGTTTCTCAACCATGTTTTTTGCCCATAGGGAAAACACAGTGAGCACTCTCGGTCGATTCGTGCTGCTTATATGGTTATTCGTAGTTCTCATAATCAACTCGAGTTATACAGCAAGCTTGACTTCAATCCTCACAGTGCAACAACTTTCTTCACCAATAAAGGGCATTGAAAGTTTGATAAACAACAATGAGCCTATTGGCTACTTGCAGGGTTCTTTCACTAAAGGTTATTTAGTCAACGAAATTGGCATCGATGCGTCGAGACTTGTAGCTCTAACAACACCAGAAGAATCTGCCACTGCTCTGGACAAAGGTCCCCATAAAGGTGGCATCGCTGCATATGTCGACGAACGTGCATACATAGAGCTGTTCCTTTCAAGCCGCTGCGATTTCAGCATTGTTGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCACGAGACTCGCCATTAGCGGTTGACCTGTCAACAGCCATTTTGGAGTTGGCTGAGAACGGCGACCTTCAACGGATCCACGACAAATGGCTTTTGCGCAGTGCTTGCCTGTCGCAAGGTGCGAAGCTCGAAGTGGACAGACTCAAGCTGAGGAGCTTCTGGGGTCTCTACCTACTCTGTGGCTTGGCATGTTTGATTGCTCTCTTCGTATATCTATTTCAAACCATGAAGCAATACAAGAAGCACTACACCGAAGACGACAAGTCGTCGTCCGGTCTAAAGTCCACGCCGTCGCGACTAAGGACTTTCCTTACATTTGTAGATGAAAAGGAAGACACAGTTAAGAGCCGCTCCAAGAGAAGGAAAACGGAGATGGCATCATTCAAAAGTACAAGTGAGGTTGGATCATCCAATAATGGATATTCAGAATCATCTTCTCAGAGAATTGAGTGTACTAATAATGAGACATGA 2721 0.4381 MLSAHICQLLFIEPNFSVGKIVKIAVEAAVKDVNSDPSILGKTQLKLSLQEDSKYRGFLSIAEALQLMATHTVAIIGPQTSTTAHVISHIANELRVPLLSFTATDPTLSSLQFPFFIRTSFNDMYQMTAIADLVNYYGWREVIAVYGDDDHGRNGIGALGDKLAERRCKISFKAPMSPEATREEITDVLVQVALAESRVIVLHTSTTWGPKVLNVAKSLGMMENGYVWIATTFLSTGIDISSPLSLSVMDDIQGVIALRMYVPDSKLKRSFISRWKNWTNGSLGLSTYAIFAYDTVYVLAHALAAFFKQGNRITFSSDSKTSLIHGDNMHLDAVKIFNEGKLLRKSIYEVNMTGVTGHFKYTSDGNLANPAYEIINVVGTGTKRIGYWSNHSGLSSVSPEELHSKPASHSSSSQKLLSVIWPGDTTQKPRGWVFPNNGRMLKIGVPKRISYREFVSQVKGTDMFKGFCIDVFLSAVNLLPYAVPYKFISYGDGHSNPSNTELVRLITTGVFDAAVGDITITTERTKMVDFTQPFIESGLVVVASVKKTDSNAWAFLMPFTPMMWTVTAIFFLVVGAVVWILEHRLNDDFRGPPKKQVATILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLINNNEPIGYLQGSFTKGYLVNEIGIDASRLVALTTPEESATALDKGPHKGGIAAYVDERAYIELFLSSRCDFSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLRSACLSQGAKLEVDRLKLRSFWGLYLLCGLACLIALFVYLFQTMKQYKKHYTEDDKSSSGLKSTPSRLRTFLTFVDEKEDTVKSRSKRRKTEMASFKSTSEVGSSNNGYSESSSQRIECTNNET* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0846 906 PANTHER GLUTAMATE RECEPTOR 15 892 - -
Ahy1g0846 906 CDD PBP1_GABAb_receptor_plant 18 397 IPR044440 -
Ahy1g0846 906 Pfam Ligand-gated ion channel 782 814 IPR001320 GO:0015276|GO:0016020
Ahy1g0846 906 Gene3D - 724 788 - -
Ahy1g0846 906 MobiDBLite consensus disorder prediction 860 906 - -
Ahy1g0846 906 SUPERFAMILY Periplasmic binding protein-like II 416 783 - -
Ahy1g0846 906 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 15 892 - -
Ahy1g0846 906 CDD GluR_Plant 439 781 - -
Ahy1g0846 906 Pfam Bacterial extracellular solute-binding proteins, family 3 498 781 IPR001638 -
Ahy1g0846 906 MobiDBLite consensus disorder prediction 878 906 - -
Ahy1g0846 906 MobiDBLite consensus disorder prediction 860 877 - -
Ahy1g0846 906 SUPERFAMILY Periplasmic binding protein-like I 17 433 IPR028082 -
Ahy1g0846 906 Gene3D - 24 369 - -
Ahy1g0846 906 Gene3D - 122 394 - -
Ahy1g0846 906 Gene3D - 440 551 - -
Ahy1g0846 906 Gene3D - 552 676 - -
Ahy1g0846 906 PIRSF IGluLR_plant 10 906 IPR017103 -
Ahy1g0846 906 SMART GluR_14 442 783 IPR001320 GO:0015276|GO:0016020
Ahy1g0846 906 Pfam Receptor family ligand binding region 23 379 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0846 Ahy-Chr1 12370474 12375594 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0846 15 872 Ion Channels AT3G51480 61.234 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0846 K05387 - gmx:100788917 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0299 5 3518463 3528410 Ahy1g0846 1 12370474 12375594 PCT
Ahy1g0846 1 12370474 12375594 Ahy5g0299 5 3518463 3528410 PCT