Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0843 ATGGAGAAAGGCACTGTGGCAATAATTGGTCCACAGTACTCAGAAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTACCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTGTTGATCACTTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCATATAAAGTACCCTTTAGGCCTAATAATAATAACAACATTAGTGAAGAAGAAATAAACAATGCATTATTCAAGATAGCTTTGATGGAATCAAGGGTAATAGTTGTTCATATAGTAGCAGATTTAGGGTTAAAAGTTCTTAAGGTTGCTCAATCACTTAGCATGATGGGGAGTGGTTATGTGTGGATAGCCACTGATTGGCTTTCCACTGTGTTAGATTCAAACCCTTCATTGTCCACAAGTTCAGCCATGAATGACATCCAAGGTGTTATTACCTTGCGCATGTATACACCTGATTCAGAATTGAAGAGAAAATTTGTGTCTAGGTGGAATAATAACCTAACCCTAAAAATGAATCATCAAGAGGGTCCTTTTGGATTGAACACCTTTGGTTTATATGCTTATGACACTGTTTGGGTCATAGCTTATGCTCTTGATGCTTTGTTTTCTGGGGGAAATAATAATAATAATAATAATAACAACAATCATAATATTTTATTCTCAAATGATTCAAGTCTAAACTTGTTAAGGGGTGACTCACTTCATCTTGATACTATGGGGGTGTTTATAAATGGTAGCACATTGCTTCAGAAGATTCTAGAAGTTAATCAAACCGGTTTAACCGGGCGGATGATGTTTGATTTAGATGGAAACTTGTTGAACCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATATTGGTCAGAATCATATGGTCTTCACACTGGTGAAGAAGTTCCAAATGATGGAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCTAGCAATGGAAGACATTTGAGAATTGGAGTGCCACTTAGGGTTAGCTACCATGAGTTTGTGTCAAGAATTGAAGGCACTGACATGTTTGGTGGTTATTGCATTGATGTGTTTTTTGCAGCACTAAATGTGTTGCCTTATACGATTCCATACAAATTTGTTTCTTTTGGTAATGGGAGAACCAATCCCTTGAATTCAGAACTTCTCCATCAGATCACAATTGGTGCCTTTGATGCCGTTATTGGGGATATTACTATTACTACAAACAGAAGTAAGATAGTGGATTTCACTCAGCCATATATAGAGTCAGGGTTAGTGGTTGTGGCACCTATCAAGGAATTGAAATCAAGTGCTTGGGCCTTTCTTATACCATTTACTCCAATGATGTGGTTTGTCACAGGAATGCTTTTTCTAATTGTTGGAGTTGTTGTGTGGATTTTAGAGCGGCCCTTTAATGATGACTTTAGAGGACCAATTAGAAGACAATTAGTCACTATTATTTGGTTTAGCTTTTCAACTCTAGTTTTCGCACATAAAGAGAAAACCGTTAGCACCCTTGGTCGCTTAGTCCTAATCATATGGTTGTTTGTGGTTCTAATACTAAGCTCTAGCTACACTGCAAGCCTAACATCAATTCTCACAGTGGAAAAACTCTCTTCCCCAGTGAAAGGAATTGAAAGCTTAGTGGTCAACAATGACCGAATTGGTATCATGAGTGGCACATATGCTGAAAATTATCTTAGTGAGGTGTTTAACATACATAGATCAAGGCTTGTTCCTTTCAATTCTCTATCTGAATTTGAGAAGGCTTTGAAGGATGGACAAGACAATGGTGGTGTTGCTGCTATCATAGCTGAGCGTGCATACATGGAGTTGTTCCTATCAACTAGATGTCAATTTGGTATTGTTGGCCAAGAATTCACCAAAATGGGATGGGGCTTTGCCTTTCCAAGGGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAGAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAGAAGTGCTTGTAGCTCAGAAGGTGCAAAACAAGGCATTGATAGGCTTGAGACTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGCTTGATTGCCCTCCTTTGCTATCTTATTAGAATGACCTACCGTTTTAGGAGGCACTACTCCAATAGTACCAACCTTGAAGTCCCATCATCATCGTCATGTTCTTCTTGTCTTAAATCATTCTTTTCTTTTGTCAATGAAAAGGAAAAGTAA 2439 0.3854 MEKGTVAIIGPQYSEMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIVDHFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISYKVPFRPNNNNNISEEEINNALFKIALMESRVIVVHIVADLGLKVLKVAQSLSMMGSGYVWIATDWLSTVLDSNPSLSTSSAMNDIQGVITLRMYTPDSELKRKFVSRWNNNLTLKMNHQEGPFGLNTFGLYAYDTVWVIAYALDALFSGGNNNNNNNNNNHNILFSNDSSLNLLRGDSLHLDTMGVFINGSTLLQKILEVNQTGLTGRMMFDLDGNLLNPSYEIINVIGTGVRRIGYWSESYGLHTGEEVPNDGNSSEGLYGVIWPGQTTQTPRGWVFASNGRHLRIGVPLRVSYHEFVSRIEGTDMFGGYCIDVFFAALNVLPYTIPYKFVSFGNGRTNPLNSELLHQITIGAFDAVIGDITITTNRSKIVDFTQPYIESGLVVVAPIKELKSSAWAFLIPFTPMMWFVTGMLFLIVGVVVWILERPFNDDFRGPIRRQLVTIIWFSFSTLVFAHKEKTVSTLGRLVLIIWLFVVLILSSSYTASLTSILTVEKLSSPVKGIESLVVNNDRIGIMSGTYAENYLSEVFNIHRSRLVPFNSLSEFEKALKDGQDNGGVAAIIAERAYMELFLSTRCQFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLETKSFWGLFLLIGIACLIALLCYLIRMTYRFRRHYSNSTNLEVPSSSSCSSCLKSFFSFVNEKEK* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0843 812 CDD GluR_Plant 390 730 - -
Ahy1g0843 812 Gene3D - 502 639 - -
Ahy1g0843 812 Pfam Ligand-gated ion channel 732 763 IPR001320 GO:0015276|GO:0016020
Ahy1g0843 812 Gene3D - 55 349 - -
Ahy1g0843 812 Gene3D - 653 737 - -
Ahy1g0843 812 SUPERFAMILY Periplasmic binding protein-like II 366 732 - -
Ahy1g0843 812 Gene3D - 384 501 - -
Ahy1g0843 812 PIRSF IGluLR_plant 1 805 IPR017103 -
Ahy1g0843 812 SMART GluR_14 389 732 IPR001320 GO:0015276|GO:0016020
Ahy1g0843 812 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy1g0843 812 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy1g0843 812 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy1g0843 812 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy1g0843 812 Pfam Bacterial extracellular solute-binding proteins, family 3 449 731 IPR001638 -
Ahy1g0843 812 Pfam Receptor family ligand binding region 3 334 IPR001828 -
Ahy1g0843 812 PANTHER GLUTAMATE RECEPTOR 1 811 - -
Ahy1g0843 812 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 811 - -
Ahy1g0843 812 SUPERFAMILY Periplasmic binding protein-like I 2 381 IPR028082 -
Ahy1g0843 812 Gene3D - 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0843 Ahy-Chr1 12339990 12344288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0843 1 812 Ion Channels AT3G51480 55.528 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0843 K05387 - gmx:100789442 1258.05