Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0842 ATGATCAAAATATGGCTCCTTGTCCTTGTGATCTTTTGCAATGGCTTCACTTCAAAAGGAACAATTAGCAATAATAATGTTCCCACAAGACCAATAACTATTAATATTGGGGCAATTTTATCTTTCAATTCAACCATTGGAAGAGTGGCTAAAGTTGCCATACAAGCAGCAGTGGATGATATAAATTCCAATGCAACCATTCTCAATGGCACTAAACTTAATATCTCAATGCAGGACACAAAATTCTCTAGTGGATTTCTAGGAATTATTGATTCATTACTATTGATGGAGAAAGACACCGCAGCCATAATTGGTCCACAATACTCAGTAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTATTGATCAATTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACCTCATATTATGTTTCCTGGAGAGGAAAGTTACAAATACAAGATGATCAAAGTTTGGGTTCTTGTCATTGTGATGTTCTATAATGGTTTTCCATCAAAAGGGACAAGCAATTGTAATAATGTTACAAGGCCAAGTACAGTTAATGTTGGAGCAATTTTATCTTTTAATTCAACCATTGGAGGAGTGGCTAAAATTGCAATACAAGCAGCAGTAGATGATATAAATTCCAATGCAACCATTCTCAATGGAACTAAGTTTAATATCTCAATGCAGGACACAAAATTCTCCCCCGGATTTCTAGGAATTATTGACTGTAAGTTCTTGTTAAAATCTACTCAAGCATGTTTATCTCCATGA 939 0.36 MIKIWLLVLVIFCNGFTSKGTISNNNVPTRPITINIGAILSFNSTIGRVAKVAIQAAVDDINSNATILNGTKLNISMQDTKFSSGFLGIIDSLLLMEKDTAAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIIDQFQWRDVIAIFIDDDHGRNGVAALGDKLAEKPHIMFPGEESYKYKMIKVWVLVIVMFYNGFPSKGTSNCNNVTRPSTVNVGAILSFNSTIGGVAKIAIQAAVDDINSNATILNGTKFNISMQDTKFSPGFLGIIDCKFLLKSTQACLSP* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0842 312 SUPERFAMILY Periplasmic binding protein-like I 237 291 IPR028082 -
Ahy1g0842 312 Gene3D - 30 211 - -
Ahy1g0842 312 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 215 310 - -
Ahy1g0842 312 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 194 - -
Ahy1g0842 312 PANTHER GLUTAMATE RECEPTOR 13 194 - -
Ahy1g0842 312 Gene3D - 236 312 - -
Ahy1g0842 312 SUPERFAMILY Periplasmic binding protein-like I 33 194 IPR028082 -
Ahy1g0842 312 PANTHER GLUTAMATE RECEPTOR 215 310 - -
Ahy1g0842 312 Pfam Receptor family ligand binding region 52 194 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0842 Ahy-Chr1 12331504 12338119 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0842 209 312 Ion Channels AT1G42540 40.000 8.57e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0842 K05387 - ahf:114927434 615.92