Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0839 ATGGCTCTAGGAACTAATTTCAAGCCTCAAATAGCTACATTATTGGATCAAAATGGTGAAAGAATTATTGGGGATTTAAATCACAATATTAGAAAACCTCCAAAAGATCATTCAATTATTCGCCATTGCAGCAGTAACGTATGGTTGGCTAAATCGGAATTAGACATTGGGATTGAAGACTTGAAAGCAAATCCAGAAGAGAAATCAAAGTTTTCACCAACATTGCGATTTGGAAGTTGTTCTGAGAAAGGACCAAAGCAGTTCATGGAAGATGAGTTTATTTGTGTTGATATCATTCACGAATATTCCAGTGCTGCTACCATGCCTTCTCCAGCAGGATTTTATGGGGTATTTGATGGGCATGGAGGAATTGATGCGGCATCATTTACCAAAATAAACATTCTTAAGCTAATAGTTGAAGATTCACATTTTCCATCCAACATTAAGAAAGCTATTAAGAGTGCATTTGTGAAAGTGGATCATGCATTTGCAGATGCTACTTCACTTGATAGTTCTTCAGGCACCACAGCAATTGTTGCCCTTATTTTGGAAAGGGACTTGATAGTTGCCAATGTGGGGGATTCTCGTGCCGTAATGGGAAAAAGAGGTAAAGCCATAGAACTTTCCAAAGATCATAAGCCAAACAGCACTTCTGAAAGATTAAGAATTGAGAAACTAGGTGGTGTGATCTATGATGGATACCTCAATGGACAACTATCAGTGGCACGTGCTCTTGGGGATTGGCACATCAAAGGTTACAAAGGTAATTCAATGTGCCCATTAAGCTCAGAGCCAGAATTAGAAGAGGTTGTATTAACAGAAGAAGATGAGTTCTTAATAATGGGGTGTGATGGATTATGGGATGTGATGAGTAGCCAATATGCTGTGACAATGGTGAGAAAGGAGCTGATGAAACACAATGATCCAATGGAATGTGCAAGAGCTCTTGTTTCTGAAGCACTTCAACGCAATGCATGTGACAATCTCACTGTTTTGGTCATTTGTTTCTCCATGGATCCACCTCCTAAGATTGAAATCATCTCTAGGTTACATAAGAGGAGGAGTATTTCTGCTGAAGCCATTGATGTTCTCAAGGGTTTGATCAATGCCACAACTTAA 1119 0.3914 MALGTNFKPQIATLLDQNGERIIGDLNHNIRKPPKDHSIIRHCSSNVWLAKSELDIGIEDLKANPEEKSKFSPTLRFGSCSEKGPKQFMEDEFICVDIIHEYSSAATMPSPAGFYGVFDGHGGIDAASFTKINILKLIVEDSHFPSNIKKAIKSAFVKVDHAFADATSLDSSSGTTAIVALILERDLIVANVGDSRAVMGKRGKAIELSKDHKPNSTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGYKGNSMCPLSSEPELEEVVLTEEDEFLIMGCDGLWDVMSSQYAVTMVRKELMKHNDPMECARALVSEALQRNACDNLTVLVICFSMDPPPKIEIISRLHKRRSISAEAIDVLKGLINATT* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0839 372 PANTHER PROTEIN PHOSPHATASE 2C 24 353 IPR015655 GO:0004722|GO:0006470
Ahy1g0839 372 SMART PP2C_SIG_2 91 336 IPR001932 -
Ahy1g0839 372 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Ahy1g0839 372 CDD PP2Cc 76 336 IPR001932 -
Ahy1g0839 372 SMART PP2C_4 66 334 IPR001932 -
Ahy1g0839 372 Pfam Protein phosphatase 2C 76 328 IPR001932 -
Ahy1g0839 372 Gene3D - 58 339 IPR036457 -
Ahy1g0839 372 ProSiteProfiles PPM-type phosphatase domain profile. 76 336 IPR001932 -
Ahy1g0839 372 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 24 353 - -
Ahy1g0839 372 SUPERFAMILY PP2C-like 68 336 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0839 Ahy-Chr1 12279052 12284028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0839 69 369 PP2C-type Phosphatase Gene Family AT3G51470 74.086 2.63e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0839 K14803 - zju:107424335 494.197