Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0836 ATGGCCAGAAAAGTTCATAACCATAAGAGACATAGTGAAGGTATGAATAATTCACAACAAAGCATGAAGCTGCAAGAAGAAGCATCAAAGATTATGTACAATCCAGAAGTTAAATTACCTCACTCTACTAAAGGATCAAAGAACAATGGTTATTCAAATGTGAATTCAGTGAGAGAATTGATGAATGAGGAGTTATCTACACAATCATGCAACCGAAATAATGTACCAAGCATCGTGGCGAGGTTGATGGGATTAGATATGATGCCATTAGGATCTAGATCTGTTGTTCTTCTATCAGATCAGTGCATAACTGATCAAAATATGGAGAATAAGATCTTTGATGATGATGGAATGGGAAAAAAGTTCACAAATCCAATGCTGCTGGAAGAAGAACTCAAGAAATTCAAGAGAGAATTTGAAGCATATCAAGCATCAAGGCTTAAGGAGGGTCCAAAAGTTGATGAAAGAATTCGAAGCGTTTCGCAAAGAACCAAGAGTGTTCAAGAAATGGTTCCATGTAATACAAATTCAAAGACAAAGAGAAAGGGAAAGGGAAAGGTAGCAATGAACAAATCTAGAAGAAGATTTGAAGATACATCACTTTCACCAACTCAGATAACTATCTTGAAGCCTTATTGCTACCATGAAGAGAGTTTGATCAATTCATCAGAAACTTCACAAGGGAGAACAAGTACTGGTGTAAAAGATTTTCTTGAGGAAGTTAAGGTGAAGTTGTTAAGTGAAATGCAGGGGAAAAGTACTTTGGAAAAGTGTTCTTCATCGGTTCGAGGAAGCGAAAATGAGAGACATAACACTAAAAAACAATCCAATTCTAAAGAAGTGGTTTGTCATAGATCAAGCGAGTTCACAGATTTTGTGACTAGGGATGTTGTTGAAGCAAATTTACTCCATTCACAATCAACAAGATCTTTTCGAAGTGAAATCGAGTTCAATGGACAGAGTTCCCCTGAATTTATCAGCAGAGGAACAATGAAGTATGCAAATTTGAATGATGATTCATTGCTTCAGAAGGAGTTATCTCCAATGAACCTTGTAAGATCCTTGTCAGCTCCTCTATCAGGAAGATTTAGCCGCTTTTCGAACGGTGATCAAATTCGGAAGAAGCTTGAAGATCTTGAAAGGATGTCTTTTGATGCTAAGAAGAAGAAGAAAGATAGATTTGGAATTAGAGAAAAAGTTTCTTATCTTAAACAAAAGTTTGGTCTAAGAGGCAAGATTTTTGCCAAAAGGATTCATTCAATGGTTGAAACTCCTAATAGCATTGAAGATGGTTTCATGGTGAGAGACATTAGAAGTGGACCAACTGTTCTCATGAAACATGGGAGAAACCATGATAACTTCACCGAGGTTCCTCCTAGTCCTGCATCTATGTGTAGCAGTGTTCATGAAGAACTTTGGAGGCAGAATGCAATTTTAAGTCCAATTTCAACTCCAAGTGTATCTTCAGTAGATGATAGCATTATGCCACAGGTTTATGGAGATATCAGCTCTGATTTAAATGAACTAAGTAAGCAACTTAGCCAACTTGAGTTTGACAGCTCAGAGGAATTCGCAACAAAGCGAAAATCTGCCGAGTACAAATTAGAACGGCTACTCGATCCGGCGGAGACTTATATAAGAGATCTTCTTGTTGCTTCTGGACTTTACTTTGGATCATGGGACAAATACCTTCAAAGAGAGGACACATTTACAAAGCCTATAGCCAACTCAATTTTTGAAGAAGTGGAAGAATCTCACAAGAAATGTTTGGTTAAAGAGAATATTATTGATAACAAGTTAGATCACAAAATGTTACTTGATTTGTTAAACGAGGCACTTTCCATTGTTCTTGGACAACCTTTGACAATGTCTAAATTCAGAAGGAAACTCAATAATTCATGCATAATACAAACTCCACCATGTGGGAAGGAACTATTGAAGCTAGTATGGGACATTATCCATGTTTCGTTGTATCCTCCAATGTCTAACACATGTTCTTATTCATTTGATAGTTTGAAGGCACAAGATTTTGGATCCATGTCATTGTATGGACTAATGAATGATGAGATCAATGTCTTAGAAATGGAGATGGCATGTTCAATTAGTGATGATTTGGTTGAAGAACTCATAAAGGATATGATGGGATTTTAA 2151 0.3663 MARKVHNHKRHSEGMNNSQQSMKLQEEASKIMYNPEVKLPHSTKGSKNNGYSNVNSVRELMNEELSTQSCNRNNVPSIVARLMGLDMMPLGSRSVVLLSDQCITDQNMENKIFDDDGMGKKFTNPMLLEEELKKFKREFEAYQASRLKEGPKVDERIRSVSQRTKSVQEMVPCNTNSKTKRKGKGKVAMNKSRRRFEDTSLSPTQITILKPYCYHEESLINSSETSQGRTSTGVKDFLEEVKVKLLSEMQGKSTLEKCSSSVRGSENERHNTKKQSNSKEVVCHRSSEFTDFVTRDVVEANLLHSQSTRSFRSEIEFNGQSSPEFISRGTMKYANLNDDSLLQKELSPMNLVRSLSAPLSGRFSRFSNGDQIRKKLEDLERMSFDAKKKKKDRFGIREKVSYLKQKFGLRGKIFAKRIHSMVETPNSIEDGFMVRDIRSGPTVLMKHGRNHDNFTEVPPSPASMCSSVHEELWRQNAILSPISTPSVSSVDDSIMPQVYGDISSDLNELSKQLSQLEFDSSEEFATKRKSAEYKLERLLDPAETYIRDLLVASGLYFGSWDKYLQREDTFTKPIANSIFEEVEESHKKCLVKENIIDNKLDHKMLLDLLNEALSIVLGQPLTMSKFRRKLNNSCIIQTPPCGKELLKLVWDIIHVSLYPPMSNTCSYSFDSLKAQDFGSMSLYGLMNDEINVLEMEMACSISDDLVEELIKDMMGF* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0836 716 MobiDBLite consensus disorder prediction 175 200 - -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 112 - -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 336 713 - -
Ahy1g0836 716 MobiDBLite consensus disorder prediction 262 280 - -
Ahy1g0836 716 Pfam Domain of unknown function (DUF4378) 544 708 IPR025486 -
Ahy1g0836 716 Pfam DUF761-associated sequence motif 76 89 IPR032795 -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 129 181 - -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 167 332 - -
Ahy1g0836 716 MobiDBLite consensus disorder prediction 1 22 - -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 336 713 - -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 167 332 - -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 129 181 - -
Ahy1g0836 716 MobiDBLite consensus disorder prediction 255 280 - -
Ahy1g0836 716 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0836 Ahy-Chr1 12237120 12240734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0836 63 713 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 34.945 2.92e-93 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0836 - - aip:107621743 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0311 5 3744271 3749467 Ahy1g0836 1 12237120 12240734 PCT
Ahy1g0836 1 12237120 12240734 Ahy5g0311 5 3744271 3749467 PCT