Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0828 ATGAAGAACACCTTGCTCACCACCCTCCTAGTCTTCAAGAACACCATTAGAGAAGAGTTGATCAGGAGTGTGCATGTATACCAAATAAAGGATGGGAAAGTAAGGGAAGTTGAAAGAGAGTTTGTATTCTCAGAGAGTGGCTCCTATGGCGAAATGAGGTCCACACCAATCCTCAGATTGCAGAAGAAGCTTTGTGTTGCTGAAGTTTCTGAAGGGTACCAAAATGGAGTGTGGCTTTGTATCTTTTCCTTTCATAGAAATCACAAGCCTCAATTTTCCAGCATTCCAAACTTGCTTTTGCTCTCAAGAAACCTGAAGCTTCGGACAATCCCAACCTTGCTGAGAGACCTCCGTGTGATATACAAATTGGAAAAAGACAAAGATGTTCTATCAGACTCCACAGGGGAAGAACGCCAAGGAAACAACAAAGATTCCCAACCATTGAGAAAAGTGGTTCCCGTGTTAACTCAGGACCTGAATTTTCTTCCTTATGAAGATGACATGTCCGAATCACCAGACAACAAGCTAGATGTCCAAGCCTTGCCAGATGCAGATTCTGCAGAAAAGAAAAAACGTGCATCTAGTGACCGGGTAGCAAAAATAACGTTATCAGAGTTAGTCAAGTATTTTGATATACCGATTGTAGAAGCGTCAAGAAGGCTAAATGTTGGACTAACAGTTCTGAAGAGGAAATGCAGAGAATTCGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCGCTTGACAGTCTCATTCATGAAATTCAGGAAGAAGCGAACAACCAAGAATCGGATGACAAGGCTGCAGCATTGGCGGCAATAGAGAAACGAAGGATGTTGGAGAGCGAAAAGGAAAACATAGAAAGGAAACCATTCATGGACATACAAAGTGAGACCAAGAAGTTGAGGCAGGACATCTTCAAGAGAAGGCATCGGGCGCGAGCTCAGGTCAAAAATAATTCGACTGTCTCCAGCAGCAGCAGTAGCAACAAAACTACCATTGAAACTTGA 1011 0.4303 MKNTLLTTLLVFKNTIREELIRSVHVYQIKDGKVREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIFSFHRNHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQPLRKVVPVLTQDLNFLPYEDDMSESPDNKLDVQALPDADSAEKKKRASSDRVAKITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEANNQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQVKNNSTVSSSSSSNKTTIET* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0828 336 MobiDBLite consensus disorder prediction 166 194 - -
Ahy1g0828 336 Coils Coil 270 290 - -
Ahy1g0828 336 MobiDBLite consensus disorder prediction 303 336 - -
Ahy1g0828 336 PANTHER PROTEIN RKD4 10 318 IPR044607 GO:0003700
Ahy1g0828 336 Coils Coil 245 265 - -
Ahy1g0828 336 ProSiteProfiles RWP-RK domain profile. 183 268 IPR003035 -
Ahy1g0828 336 MobiDBLite consensus disorder prediction 317 336 - -
Ahy1g0828 336 Pfam RWP-RK domain 200 248 IPR003035 -
Ahy1g0828 336 PANTHER PROTEIN RKD5 10 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0828 Ahy-Chr1 12175027 12179376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0828 16 329 AtRKD Transcription Factor Family AT4G35590 45.732 9.87e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy1g0828 RWP-RK 2.20E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0828 - - adu:107475952 607.446