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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ahy1g0823
ATGGGAGGTGACAGTGCCGCAGAGAGGTCTACGGATTCAAAGGTCTCTGAACCCGTCAGCATCAACATTCGGTGTTCCAATGGTTCCAAGTTCTCGGTTCAGATTTGCCTCGATTCCACCGTCGGATCCTTCAAGGAAGTCATTGCTGGCAGCTGCGATATCCCAGCCGGTCAGCAGCGCCTGATTTACAAGGGTCGGATCCTGAAGGATGATCAGACCCTACAAAGCTATGGCTTGGAGGCAGATCACACCATCCATTTGGTTCGTGGCTTCACACCTTCCAATACAGGTGGGGGCACAAATACCAGTGGCACCAATACCGCCACGACTAATGCCAGAAGTACTGGTGCTGCTGAGGGTGGGGGCTTAGGAGGCCTTGGTTTTGGAGCTTCATTGTTCCCTGGATTAGGTTTGAATGGGATGGGTGGCAATAACCTATTTGGAGAGGGATTTCCGGATCTTGAGCAGATGCAGCAACCATTTATTTCAAATCCCAATTTAATGAGAGAAATTATGAACACACCTGCTATGCAGAACCTAATAAATAATCCTGAGATTGTGCGGAATCTTATAATGAGCAACCCGCAGATGCAGGAGCTCATGGATCGGAATCCTGAGTTAGCTCACATACTTAATGATCCAAGCACCCTCCGCCAGACACTTGAAGCTACAAGGAACCCTGAGATTATGCGTGAAATGATGAGAAATACCGACAGAGCAATGAGCAACATTGAAGCATCTCCTGAGGGATTTAACATGTTGAGGCGCATGTATGAAAATGTTCAAGAACCATTTTTAAATGCTACTACGATGGCTGGAAACACAGGAGGCAACAATACACCACTTTCTGGGACTCAAGCCAGGGACCAATCAACAAATCCCTCAACTACTAGCTCCGAAGCAACTGCTGGTTCTCCATTACCCAATACTAACCCACTCCCCAATCCTTGGTCCTCTACGGGAACTGGTGGTGCCCAAAATAACAATAGAAGGTCAACCCCTGCTGGTGGGGATGCTAGGCCGCAGGCACCTACTGGCTTAGGAGGGCTTGGACTGCCGGATCTTCAAGGCATGCTGGGCGGCAATGCTATGCCAGATCCTGCTTTAATGGCCCAGTTAATGCAAAATCCAGCTATCTCAAATATGATGCAAAGTATGCTTTCCAACCCACAAACTTTGAATCAGATGCTTGGAGCTAATGCTGATCAGCGTGGCATGCCTGATTTGAATTCTCTTAGAGAAGTGATGCAAAATCCAGAGTTCCTTCGCTTATTTTCTTCACCTGAGACACTGCAGCAACTGATGTCTTTTCAGCAAGCTCTTCTGTCTCAGCTTGGTCAACAACAGCCACGGGAATCAGGTCAAACTGGCGGAGGCACTGGTCCTTTGAACAACTTGGCAGGTTTGGAGTTGTTATCAAGCATGTTTGGTGGACTTGGAACTGGCAGCCTAGCTGTTCCAAATAGATCAAATGAGCCGCCCGAGCAGTTGTATGCAACCCAGCTTTCTCAGCTTCAAGAAATGGGATTCTTCGACACGCAAGAGAACATAAGGGCCCTTATTGCCACATCCGGTAATGTTCATGCAGCAGTTGAACGACTTCTAGGAAACCCTGGTCAGTAG
1623
0.4812
MGGDSAAERSTDSKVSEPVSINIRCSNGSKFSVQICLDSTVGSFKEVIAGSCDIPAGQQRLIYKGRILKDDQTLQSYGLEADHTIHLVRGFTPSNTGGGTNTSGTNTATTNARSTGAAEGGGLGGLGFGASLFPGLGLNGMGGNNLFGEGFPDLEQMQQPFISNPNLMREIMNTPAMQNLINNPEIVRNLIMSNPQMQELMDRNPELAHILNDPSTLRQTLEATRNPEIMREMMRNTDRAMSNIEASPEGFNMLRRMYENVQEPFLNATTMAGNTGGNNTPLSGTQARDQSTNPSTTSSEATAGSPLPNTNPLPNPWSSTGTGGAQNNNRRSTPAGGDARPQAPTGLGGLGLPDLQGMLGGNAMPDPALMAQLMQNPAISNMMQSMLSNPQTLNQMLGANADQRGMPDLNSLREVMQNPEFLRLFSSPETLQQLMSFQQALLSQLGQQQPRESGQTGGGTGPLNNLAGLELLSSMFGGLGTGSLAVPNRSNEPPEQLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNPGQ*
541
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ahy1g0823
540
Gene3D
-
189
247
-
-
Ahy1g0823
540
CDD
UBA_PLICs
498
536
-
-
Ahy1g0823
540
ProSiteProfiles
Ubiquitin-associated domain (UBA) profile.
492
537
IPR015940
-
Ahy1g0823
540
PANTHER
UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2A-RELATED
3
540
-
-
Ahy1g0823
540
SUPERFAMILY
UBA-like
494
536
IPR009060
GO:0005515
Ahy1g0823
540
MobiDBLite
consensus disorder prediction
443
462
-
-
Ahy1g0823
540
Pfam
UBA/TS-N domain
498
534
IPR015940
-
Ahy1g0823
540
Pfam
Ubiquitin family
21
88
IPR000626
GO:0005515
Ahy1g0823
540
PANTHER
UBIQUILIN
3
540
-
-
Ahy1g0823
540
SMART
CBM
144
181
IPR006636
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ahy1g0823
Ahy-Chr1
12096298
12100660
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ahy1g0823
19
88
Cytoplasmic Ribosomal Protein Gene Family
AT3G52590
31.429
1.40e-06
45.8
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ahy1g0823
K04523
-
gmx:100776447
812.372
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Ahy5g0325
5
3910875
3915302
Ahy1g0823
1
12096298
12100660
PCT
Ahy1g0823
1
12096298
12100660
Ahy5g0325
5
3910875
3915302
PCT
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