LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy1g0822	ATGAAATATAAGCATGATGTGTTCATCAGCTTTAGAGGCACCGATGTCCGGCGTGGTCTGCTTAGCCATCTGAAGAAAGATCTGCACCGTGAGAAGATTGATTTCTATGTAGATGATGCTAAACTTAAGAAGGGAGATAAAATATTATCACTACTCACGGCAATTGAAGAGTCGCTAATTTTGTTAGTTATATTCTCAAAAGACTATGCTTCTTCGAAATGGTGTTTGGCTGAGCTCGAAAAGATAATAGAGTGTGCTGAAAAAAATGAACAAATTGCTGTGGTACCTGTCTTCTATAAACTAGATCCATCAGAGGTGCGGCACCAGAGAGGAGATTATGCTGCTGCTTTTGTTAAACATGAAGCTAGGGAAGACAAGGTCAAGGTACAAAAATGGAGATATGCTCTAACTAAAGCTGCTGAATTTTCAGGATTTCATTATCCGATGGACTCTGAGTTGGATGAATCCGATGTTGTTGATGAAATTGTAGAAGACATTTGTAGCAAACTGAGAAAGTTTTCCTCAAGTGAATCAGATGACCCAGCTAAATCAAATGGCCTTGTTGGAATTGATAAAAATATTGGATGGATTAACTCCTTAATGACAAATAATTCAGAACAAGTTCTAAAGATTGGGTTTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCTCAACTTGTGTTTGACAAATTTTCTCACCAATATGAGGGCTGCTACTTCTTGGAGAATATAAGAGATGAACTGAAAAATAATCAGTTAAATTATTTAAGAGACGAAGTTGTTTCTAAGCTATTAGGGGAAGAAAATCATCATATAACTGGTGCAAGCAGGGCAAATTCCTCCACCATGAGGAGGCTAAGTAAGAAGAAGGTTATCCTTGTGCTAGATAATGTGAATACTCCAAAGCTTCTAAGAGATTTCCTCGAACCAATTGACTTGGGGCCAGGGAGTAGAGTGATTGTAACTAGCAGAAATCAGCAAGTGTTTACTGCAGGAGTATTTCATGAAATACACCATGTCAAGGAGCTGAAGTCTGAAGAATCCCTTGAACTCTTCTGTTTAAATGCCTTCAATGAAAGCCAACCCAAAAGGGGATTCAAAGAGCTATCTAGAGAGGCAGTTGCTATTGCCAAGGGTGTCCCATTAGCTTTAAAAGTTTTTGGTTCATATTTCCATTCTAAAAGTAGTGACATATGGAAATGTGCCCTAGAAAGATTCAAGAAGTATCCTGATCCTGATGGGGAAATTCAAAGTGTGTTGAGGTTTAGTTATGATGAATTACATGACATAGAGAAAAAGGTTTTTCTAGATATTGCATTCTTTTTCAAAGGAGAAGATAAAGATTATGTCATAAGCCAGCTGGATGCTTGGAACTTTCATGGACCTAGTGGAATAGCCTCTCTCCAAGAGAAAGCTCTTATAACCATTTCAAAGGACAATAAAATACAAATGCATGATTTATTGCAAAGAATGGGTTGGGAAATAGTTCGTCAAGAATCTGCTACTCCCGGACGACGAAGCCGAGTGAATGATCCAGAGGAAGTGTATGACATATTGAAGAATAACAAGGGAAGTGATTCAGTGGAAGGCATACTGTTAGATTTATCTCAAATCGGAGAGGTAGCCTTGAATGTTGACAGCCTTAAAAAGATGCCTAATCTAAGATTAATCAAGGTTTACTCTCCATTGCCTATTGAGGTTCCTATGCAAATTAGATATTTTATACCACAGGATTTTCTCAGTGTGCTTTACAAAAGAATAAAAATGGATGACTTGACAGAAGAGTTATTGGAAGAATCTGGAAGCTTGAATCAATCATGTGATAATGAGGATATCGATGATGTCGTTGAAACTATCAAGGGAACTCAAGTAGATGGCATAAAAATTCTTGACACTATTATAGAGATGCATATTTTGGGAATGCCTAAATTAAACATGCCGATGCATGTGGAGCATCCTATGCCTGGTTTGCCGATAATGCAGGATTTGGTAAAGGATACAAAGGGTATATCCACTCAGCCTCTGATGCTGTCGAAGTTGTCTAAGTTGGGGGGTGTTCATAAATTGGCAAATTACAATGAAAATGATGGAGTTCTGGTTTTAGCAACAAATGATCTAAGTAGATCAATGCCACAGCGGAATCCCAACATTGGATCTGCAGTGAAAGAGTTGATCAGCCTTGGAAGTGAGTTTCACGTGAAATCCACTCACCATCTTTTCATGGAAGGTTCCTCAGTTTCAAAGGGCTTGTCCTTCTCAACAAAGGAAATAAGATCAATAAATTCAACCCTTAACAGAACGGAAGCATTGAACTCCTCCGTGGAGCTCTTCAAGAATCTTGAATGCTCAGATGCTAAAGCTCTACAATGTTATGCAGAGACTAGAATGGAACTATTGAACTCCTCCACGGGGTGCTTCATTTCTCATGATTACTCAGATATTGATGATCTGCAACTTGAGACTACCCGTAAAGATGAGTTATCTTTTCTGAGATCTACAAACTATTACAGGCTTTCTAATTGCAGAGAGAATAAACATATTGGGAAACCGAAGCTTCTAGTCCTGTTTGATGGGCTACGGTATTCCGAACAAATGTCTATCTTGGTTCTTGGTGGATCGAGCCTCCAATGGAGTTATTTATGGTGCATAAGTAATAATTCTCAGTTTATGCAACTTCCTGTTGGTCCTCAGTTAACGAATTGTGTAAAATTGTCTCTAGAAGTATCTCCAGGGAGTTTGCCTTCGCCTTTGCTTTTGAGCATCATGCATCTTCCTCCGCATCTTAAAAGCCTGTCAGTGCGTGGTGGTAGAAGTTTTTGGCATAAAATAAAGCTTCCACCATTCATTCCAGACGTGCGTACTTGCCGCAGAATGCGCATGTGGCGGGAAAGTTTGCCATCGAAGATCAATCATCATGTGTATATGGAACACCTGTCATTGCCTAGAAATTTACAGCCTATAATGGAGTTTCCAACATCCATTCAATCCTTGGATATTGATGGCTACATTATGCCAGAGGGTTTGTCTTCAAGCTTCACTTATCTTCCACATCTTGAAAGCTTGTCATTGGATTATTGTACAGACCTTCCGTTTACATCAGAGCTTCCATCATTCGTTCAATCTTTGGAAATTTCCAACGGCATTATTTCAAAGAGTTTGTCTTCAAACTTCAAGTATCTTTTACATCTTAAAGTCCTGCCTTGGAGAGATTGTAGCAATTTTCGATTTACATCAGAGTTTTTATCATCCATTCAATCATTGAAAGTTTCCAACTGTCTTATGTTGAAGAGTTTGTCTTCGAGTTTCAAGTATCTTTCTAATCTTAAAGACCTGACATTGAAAAATTGTAGCAATCTTCGATCTATATCAGAGCGTCCATCATCCATTCAGTCCTTAAAAATTTTCAACTGCATTATGCTGGAGAGTTTGCCATCGAGGTTCAAATATCTCTCTAGTCTTAAAGACTTGACATTGAGAGATTGTATCAATCTTCGATGTATATCAGAGCTTCCACCATCCATTCAATACATGGAAATTTTCAACTGCATTATGCTGGAGAGTTTGCCTTCGAGCTTCAAGTATCTTTCTAGTCTTAAAGATCTGACATGGAGAGATTGTAGCAATCTTCGATCTATATCAGAACTTCCACCATCTATTCAATCCTTGAAAATTTTCAACTGCATTATGATGGAGAGTTTGCCTTCGAGTTTTAAGTTTTTTTCTACTCTTGAAAGCCTGACAATAAGCAATTGTAGCGATCTAGAAGAATTTCTTCCTAGCTTTCACCATCCATTCAATACTTGA	3807	0.384	MKYKHDVFISFRGTDVRRGLLSHLKKDLHREKIDFYVDDAKLKKGDKILSLLTAIEESLILLVIFSKDYASSKWCLAELEKIIECAEKNEQIAVVPVFYKLDPSEVRHQRGDYAAAFVKHEAREDKVKVQKWRYALTKAAEFSGFHYPMDSELDESDVVDEIVEDICSKLRKFSSSESDDPAKSNGLVGIDKNIGWINSLMTNNSEQVLKIGFWGMGGIGKTTIAQLVFDKFSHQYEGCYFLENIRDELKNNQLNYLRDEVVSKLLGEENHHITGASRANSSTMRRLSKKKVILVLDNVNTPKLLRDFLEPIDLGPGSRVIVTSRNQQVFTAGVFHEIHHVKELKSEESLELFCLNAFNESQPKRGFKELSREAVAIAKGVPLALKVFGSYFHSKSSDIWKCALERFKKYPDPDGEIQSVLRFSYDELHDIEKKVFLDIAFFFKGEDKDYVISQLDAWNFHGPSGIASLQEKALITISKDNKIQMHDLLQRMGWEIVRQESATPGRRSRVNDPEEVYDILKNNKGSDSVEGILLDLSQIGEVALNVDSLKKMPNLRLIKVYSPLPIEVPMQIRYFIPQDFLSVLYKRIKMDDLTEELLEESGSLNQSCDNEDIDDVVETIKGTQVDGIKILDTIIEMHILGMPKLNMPMHVEHPMPGLPIMQDLVKDTKGISTQPLMLSKLSKLGGVHKLANYNENDGVLVLATNDLSRSMPQRNPNIGSAVKELISLGSEFHVKSTHHLFMEGSSVSKGLSFSTKEIRSINSTLNRTEALNSSVELFKNLECSDAKALQCYAETRMELLNSSTGCFISHDYSDIDDLQLETTRKDELSFLRSTNYYRLSNCRENKHIGKPKLLVLFDGLRYSEQMSILVLGGSSLQWSYLWCISNNSQFMQLPVGPQLTNCVKLSLEVSPGSLPSPLLLSIMHLPPHLKSLSVRGGRSFWHKIKLPPFIPDVRTCRRMRMWRESLPSKINHHVYMEHLSLPRNLQPIMEFPTSIQSLDIDGYIMPEGLSSSFTYLPHLESLSLDYCTDLPFTSELPSFVQSLEISNGIISKSLSSNFKYLLHLKVLPWRDCSNFRFTSEFLSSIQSLKVSNCLMLKSLSSSFKYLSNLKDLTLKNCSNLRSISERPSSIQSLKIFNCIMLESLPSRFKYLSSLKDLTLRDCINLRCISELPPSIQYMEIFNCIMLESLPSSFKYLSSLKDLTWRDCSNLRSISELPPSIQSLKIFNCIMMESLPSSFKFFSTLESLTISNCSDLEEFLPSFHHPFNT*	1269

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy1g0822	1268	Pfam	TIR domain	4	179	IPR000157	GO:0007165
	Ahy1g0822	1268	SUPERFAMILY	L domain-like	979	1261	-	-
	Ahy1g0822	1268	Gene3D	-	2	174	IPR035897	-
	Ahy1g0822	1268	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	181	439	IPR027417	-
	Ahy1g0822	1268	SUPERFAMILY	Toll/Interleukin receptor TIR domain	2	145	IPR035897	-
	Ahy1g0822	1268	Gene3D	Ribonuclease Inhibitor	951	1175	IPR032675	-
	Ahy1g0822	1268	Gene3D	Ribonuclease Inhibitor	1176	1265	IPR032675	-
	Ahy1g0822	1268	Pfam	NB-ARC domain	197	408	IPR002182	GO:0043531
	Ahy1g0822	1268	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	4	569	IPR044974	GO:0006952
	Ahy1g0822	1268	SUPERFAMILY	"Winged helix" DNA-binding domain	416	501	IPR036390	-
	Ahy1g0822	1268	Gene3D	-	175	335	IPR027417	-
	Ahy1g0822	1268	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	4	569	-	-
	Ahy1g0822	1268	PRINTS	Disease resistance protein signature	286	300	-	-
	Ahy1g0822	1268	PRINTS	Disease resistance protein signature	378	392	-	-
	Ahy1g0822	1268	PRINTS	Disease resistance protein signature	210	225	-	-
	Ahy1g0822	1268	PRINTS	Disease resistance protein signature	1014	1030	-	-
	Ahy1g0822	1268	ProSiteProfiles	TIR domain profile.	3	170	IPR000157	GO:0007165
	Ahy1g0822	1268	Gene3D	-	343	429	IPR042197	-
	Ahy1g0822	1268	SMART	till_3	4	142	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy1g0822	Ahy-Chr1	12060605	12068169	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy1g0822	5	561	WRKY Transcription Factor Family	AT4G12020	31.786	1.30e-60	227

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy1g0822	-		-	adu:107475985	2385.91