Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0794 ATGGGTGCATCGTCACACAAATGGTTGAGAATTATTCGGAGGAAGTTCCTTAGATTATCCAACAAAGACAACATCATCATCACTACTCTACCTTACACAAGAAGAAACCAACTCGAAGAAGATGATAATGAAGCCACCATAGGAAGCAATAATGAAGAAGAAACCACCACCATAGCTAAGGAAGATCTTGCGGCAATCAAGATCCAAGCTTATTTTAGGGGTCATCTTGCAAGAAGAGCATATGGAGCTCTTAGAAGCATTGTGAAGGTGCAAGCATTGGTGCGTGGTGTTTTTGTGAGGAAACAATCCCATATTGCTATGCAATGTATGCATGCAATTCTTCGTTTACAACTTAGGGTTCGAGCAAGGCAGCTCCACCTCCATGGAACCTTTCATAATTATTAA 405 0.4099 MGASSHKWLRIIRRKFLRLSNKDNIIITTLPYTRRNQLEEDDNEATIGSNNEEETTTIAKEDLAAIKIQAYFRGHLARRAYGALRSIVKVQALVRGVFVRKQSHIAMQCMHAILRLQLRVRARQLHLHGTFHNY* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0794 134 Pfam IQ calmodulin-binding motif 64 81 IPR000048 GO:0005515
Ahy1g0794 134 Pfam IQ calmodulin-binding motif 85 102 IPR000048 GO:0005515
Ahy1g0794 134 PANTHER IQ-DOMAIN 5-RELATED 6 126 - -
Ahy1g0794 134 PANTHER OS04G0561100 PROTEIN 6 126 - -
Ahy1g0794 134 ProSiteProfiles IQ motif profile. 85 112 IPR000048 GO:0005515
Ahy1g0794 134 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
Ahy1g0794 134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 104 IPR027417 -
Ahy1g0794 134 SMART iq_5 83 104 IPR000048 GO:0005515
Ahy1g0794 134 SMART iq_5 60 82 IPR000048 GO:0005515
Ahy1g0794 134 Gene3D - 59 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0794 Ahy-Chr1 11821115 11821910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0794 33 128 IQD Protein Family AT3G51380 56.250 4.35e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0794 - - ccaj:109793784 129.028