Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0789 ATGGGAGACTTCAAATCTGACTGTCCCAAGTTAAAGAAAGAGGAGAAGCAAAAAGGGGAAAAGAAGAAGAAGGGTCTGATGGCATCATGGGAAGACTTAGAAAATGACTCAGACAGTGATGAAGAATCTGAGACCAAGTCACAGCCTTGTCTCATGGCAAATCATGTAGATCAGCTTGATGTAATTGCAAGCCTATTAAGTGGAAGACTTGTGAGAGAAAGGATTGGTCCAGCAATGTTAAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAGATTAACTTTGATGATGTTCAAAACATCTTTGACACTGGTGGTGCAAAAGGCTTATCAAAAGATTCAGTTGAAAAGATCTCAAAGATCATAATTACAAGTGACAACAATGTTGATGCTTCTGGTGAAAAGGTTTCTTGCTCAGTTTGCCTTCAGGACTTTCAAATTGGAGAAACAGTTAGAAGCTTGCCCCATTGCCATCACATGTTTCACCAACCTTGCATTGACAAGTGGCTCATAAGGCATGGATCTTGCCCTCTATGTAGAAGGGATCTGTAA 549 0.4098 MGDFKSDCPKLKKEEKQKGEKKKKGLMASWEDLENDSDSDEESETKSQPCLMANHVDQLDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEINFDDVQNIFDTGGAKGLSKDSVEKISKIIITSDNNVDASGEKVSCSVCLQDFQIGETVRSLPHCHHMFHQPCIDKWLIRHGSCPLCRRDL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0789 182 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE, YMGG-LIKE GLY-ZIPPER-RELATED 52 182 - -
Ahy1g0789 182 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 52 182 IPR044523 -
Ahy1g0789 182 SUPERFAMILY RING/U-box 136 182 - -
Ahy1g0789 182 MobiDBLite consensus disorder prediction 1 31 - -
Ahy1g0789 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 182 IPR013083 -
Ahy1g0789 182 Pfam Ring finger domain 136 179 IPR001841 -
Ahy1g0789 182 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Ahy1g0789 182 SMART ring_2 137 178 IPR001841 -
Ahy1g0789 182 MobiDBLite consensus disorder prediction 1 50 - -
Ahy1g0789 182 CDD RING-H2_PA-TM-RING 137 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0789 Ahy-Chr1 11786479 11803984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0789 59 182 C3H Transcription Factor Family AT5G66070 75.000 4.37e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0789 - - ahf:112804151 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0002 11 37985 42116 Ahy1g0789 1 11786479 11803984 hybridization