Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0787 ATGGTTGATGGATATAGAAGTATGGTGGAGAACCCATCACCAATGAGAAACGCAACAAATCACATGATGCTGGGATTTCTTGCTGGAATTTCGACAGTTATGTTAGTTGCTGCCATATTGTTCTGCCTCTTTGGAACAAAGCTCATTGCACTTTTCAAACAACATAGGACTTTGAAAGGTAAAGAGTACAACAGCTTCAAAGATGAAACAATGCCTCTAAGGCGTTTTACCTTTGATGAAATAGAGAGAGCTACCAAGAACTTTAGCCAAGAATTCTTACTTGGTTCTGGTGCATTTGGAAATGTTTACAAAGGAAATTTTGAATTAGAAGGAACTTTAGCCATTAAGAGAGCTCACGGCGAATCCTTCTTAAGCGTCGATGAATTCCGAAATGGTAAATTTGGGGCAAGAATTCTGGTATATGAATATGTACCAAATGGCTCTCTGCTTGAATATATGATTGGGAACAAGAATAGCTTGACTTGGAAGCAAAGAGTGAACATAGCAATAGGAGCAGCTAGAGGCATAGCTTATTTACATGAAGGAATAAAGCCGAGTATAATTCATCGTGATCTCAAACCAAGTAACATCCTATTAGGTGAAGGTTTCGAGGCTAAGGTCTCGGATTTCGGGTTGGTGAAATCCGGCCCTATTGAGGACCAATCACATGTGAGTAGCCAAATCAAAGGGACACCAGGGTATCTTGATCCGGCATACTGTTCAAGCTTTCACTTGACAAAATTCACTGATGTTTATAGCTTTGGTGTCATACTTCTTCAACTTGTTTCAGCTAGACCTGCTGTTGATACAAATGAGGTACAAAGCAAGCAACATATAATTGATTGGGCAAGCCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATCATAGATGCAAACTTGCTATGTCAAAGTGAGCCATGCAATATGAGAGTTATGCTGAAGATGGGTCAACTTGCTTTAAGATGTGTGGTTCAAGAACCAAAAAGTAGACCTACAATGATTCAAGTGTGTCAAGAACTAGAACAAGCACTATACTCTGAAGATACCTTCAACAACAAGCAACATTCTTCAAAGGGTTTCCCATCAATTGGATTGTCTCAGCAATCATCAGTGGAAAAGAATGATAGCTTTGTGAGCATAGATGGTGTTGGACTTCAGAAATTCCATATTGATATGGATAGCTTATCATTTCAGAGTACAAGGTTAATGTGCCTAGAAAATAATAGTATAAGTATTGACATTGATAACAACAACTTGAAGAGAATTCAAGAGGATGGGGACATATAA 1287 0.3862 MVDGYRSMVENPSPMRNATNHMMLGFLAGISTVMLVAAILFCLFGTKLIALFKQHRTLKGKEYNSFKDETMPLRRFTFDEIERATKNFSQEFLLGSGAFGNVYKGNFELEGTLAIKRAHGESFLSVDEFRNGKFGARILVYEYVPNGSLLEYMIGNKNSLTWKQRVNIAIGAARGIAYLHEGIKPSIIHRDLKPSNILLGEGFEAKVSDFGLVKSGPIEDQSHVSSQIKGTPGYLDPAYCSSFHLTKFTDVYSFGVILLQLVSARPAVDTNEVQSKQHIIDWASPSLEKGNVEEIIDANLLCQSEPCNMRVMLKMGQLALRCVVQEPKSRPTMIQVCQELEQALYSEDTFNNKQHSSKGFPSIGLSQQSSVEKNDSFVSIDGVGLQKFHIDMDSLSFQSTRLMCLENNSISIDIDNNNLKRIQEDGDI* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0787 428 Pfam Protein kinase domain 137 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0787 428 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Ahy1g0787 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Ahy1g0787 428 SMART serkin_6 88 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0787 428 ProSiteProfiles Protein kinase domain profile. 88 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0787 428 Gene3D Phosphorylase Kinase; domain 1 49 134 - -
Ahy1g0787 428 SUPERFAMILY Protein kinase-like (PK-like) 65 341 IPR011009 -
Ahy1g0787 428 PANTHER OS01G0750732 PROTEIN 19 377 - -
Ahy1g0787 428 Gene3D Transferase(Phosphotransferase) domain 1 144 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0787 Ahy-Chr1 11771117 11774670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0787 64 378 Receptor kinase-like Gene Family AT1G30570 40.059 4.20e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Ahy1g0787 Pkinase 1.70E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0787 - - var:108328541 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0004 11 58802 62508 Ahy1g0787 1 11771117 11774670 hybridization