Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0684 ATGAGGGAGTTGTTTCATCATCATGGCTACTACAACATGGTACCAACAACAACAACAACAACATCAAGAAGTGATTTTTTGTTTGGATTAGGGGAAAATAACAACAACAACAATAATAATAATGACATTATTGTTGAATTAGAAAATGGTGGTTATGGGAGAGATGTTCTTGAAAATGGGGTGCTAGAAGAGTTCACTAATCATCATCAAGAAGTGGCTAATAAGAAGAGAGGAGGAAAAAGGAGCATTAACAACAATAATAAGCAATTTAGTAGTACTAACACTGAGAGACAAAGGAGAGTGGATTTGGGTGGCAAATTTGATGCTTTGAAAGAACTCATACCAAGCTCCACCAAGAATGATAGAGCATCAGTGGTAGGAGATGCTATTGACTACATCAAAGAGCTTCTAAGAACAGTGAATGAACTCAAATCATTGGTGGAGAAAAAGAGGTATGAAAAACAAAGGGTGAAGAAGAAGCTCAAAATTGAAGATGAAGAAGAAGAAAAAGAAGATGATGAGAATAATTCATCATCATATAGTGAGAGCCTAACAAGGAGTTCTTGGATACAAAGAAAATCAAAAGAAAGTGAGGTTGATGTGAGAATCATTGACAATGAGGTAACAATAAAGATTGTTCAAAGGAAGAGGGTCAATGACAATAATTGCATATTAGTTTATGCTTCAAAGGTTCTTGATGAACTTAAACTTGATCTTCAACATGTTGGTGGTGGCCACATTGGTGATTTCTGCAGCTTTCTCTTCAATAGCAAGATATGTGAAGGTTCATCGGTATATGCTAGTGCCATAGCCAACAAGCTTATTGAGGTCATGGACAGAAGTTTGTCACCAATATGA 858 0.3601 MRELFHHHGYYNMVPTTTTTTSRSDFLFGLGENNNNNNNNNDIIVELENGGYGRDVLENGVLEEFTNHHQEVANKKRGGKRSINNNNKQFSSTNTERQRRVDLGGKFDALKELIPSSTKNDRASVVGDAIDYIKELLRTVNELKSLVEKKRYEKQRVKKKLKIEDEEEEKEDDENNSSSYSESLTRSSWIQRKSKESEVDVRIIDNEVTIKIVQRKRVNDNNCILVYASKVLDELKLDLQHVGGGHIGDFCSFLFNSKICEGSSVYASAIANKLIEVMDRSLSPI* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0684 285 SMART finulus 93 142 IPR011598 GO:0046983
Ahy1g0684 285 Gene3D - 86 164 IPR036638 GO:0046983
Ahy1g0684 285 PANTHER TRANSCRIPTION FACTOR BHLH91 2 282 IPR045895 GO:0006355|GO:0048658
Ahy1g0684 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 154 IPR036638 GO:0046983
Ahy1g0684 285 MobiDBLite consensus disorder prediction 79 98 - -
Ahy1g0684 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 136 IPR011598 GO:0046983
Ahy1g0684 285 Coils Coil 133 183 - -
Ahy1g0684 285 CDD bHLH_AtMYC1_like 95 151 IPR045896 -
Ahy1g0684 285 Pfam Helix-loop-helix DNA-binding domain 95 136 IPR011598 GO:0046983
Ahy1g0684 285 PANTHER TRANSCRIPTION FACTOR BHLH91 2 282 - -
Ahy1g0684 285 MobiDBLite consensus disorder prediction 74 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0684 Ahy-Chr1 10474392 10476587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0684 72 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 48.214 1.82e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy1g0684 HLH 4.40E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0684 - - aip:107643853 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0108 11 1116077 1118524 Ahy1g0684 1 10474392 10476587 hybridization