Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0673 ATGGGAGACAGAGAGAATTTCGAGGTAGATAGAGACCGGGATCGCGTGAATTATTCGACTAGTATGGCTTCGGATTGGAGGTTTGGTGTTGGGAACTTTGCAAATTCAATGGTGGATTCGTATGTTACAAACTTTTGGGACCACCCCAATTCCCAGAACCTGGGATTTTGTGACATTAATGGGGGCTCTTCGAACATGAACGTGATTGGAAAAGATGGATTCGGCTACGGTAGAGGCAGTCATGATCATAGGACACTAGAAATGGGTTGGAACCATGCTAGTTCTGTGTTGAAGGGTGATAACAATGCTTTCTTGCCTAATGGACCAGCAATGCTTCCTCAGAGTTTATCTCAGTTTCCGAGTGATTCCGGATTCATCGAGAGGGCTGCGAGACTCTCGTGCTTTGGCGCTGGGAATTCCGTGGACATGGTGAACTCATTTGGGATTCCTCAATCCATGAACCTTTATGCTAGGATTGGGGGAACAATGCAGGGAACAGGGGATGCTCTTTTAGGACATGGATTAAGATCAGCAGCACTCGGAGGACAATCTCATAAAAGTGATCCGAATGTAGTTGAAGATGCGAAAGATGATAAAGAAATGACTCTCCAGGATGATAAAAGAAGTGAAAATCTTGCAGTGTCTCATGATGAAGGGAAACAAGCTCTTGGTGGTTCTGCTAATGAATCAGATAGAGCCGAATCGAGTGGCCGAGATGATTCCCCAATGTTGGAGTGTACAAGTGGGGAGCCTTCGAATAAGGGACTAAGCTCAAAGAAAAGGAAAAGAATTGGACTAGATGCCGATAAAGATAAAGTCGATGGAAGTCCTGAACAACCTGGTGCAGCCGTGAAGGAGAATTCCGGGAGTCGACAGCAAAAGGGGGAGCAACAACCAACTCCATCAACCAAGGGGTCCGGGAAGAATGCCAAGCAGGGTTCTCAAGCATCTGATTCACCTAAGGAGGAGTACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAATAGCCACAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATCAGCGAGCGTATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACGGGAAAGGCGGTGATGCTAGACGAAATTATAAACTATGTACAGTCTCTTCAAAGACAGGTTGAGATTCTTCAGCAACGGGCCGGTACTTCTTCCGCGCATGGGTTTCCTCCAGAATTGTCCATGGCTTTTCCGCCATTACATCCATCTCGACCAGGACTTATTCATTCGACTCTTCCTAGCATGGCAAATTCATCGGATATACTTCGGCGGACGCTTCAACCAAATTTGGCGCACTTGAGCGGAGGATTCAAGGACCCAAATCAGCTTCCTGAAGTCTGGGATGACGAGCTTCACAACGTTGTACAGATGACATTTCCGACATCTGCCCCTCCGAGTTGCCAAGACCTGGATGGTTCTGCGCCTTCGGGTCAAACAAAAACTGAACCTTGA 1491 0.4728 MGDRENFEVDRDRDRVNYSTSMASDWRFGVGNFANSMVDSYVTNFWDHPNSQNLGFCDINGGSSNMNVIGKDGFGYGRGSHDHRTLEMGWNHASSVLKGDNNAFLPNGPAMLPQSLSQFPSDSGFIERAARLSCFGAGNSVDMVNSFGIPQSMNLYARIGGTMQGTGDALLGHGLRSAALGGQSHKSDPNVVEDAKDDKEMTLQDDKRSENLAVSHDEGKQALGGSANESDRAESSGRDDSPMLECTSGEPSNKGLSSKKRKRIGLDADKDKVDGSPEQPGAAVKENSGSRQQKGEQQPTPSTKGSGKNAKQGSQASDSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEILQQRAGTSSAHGFPPELSMAFPPLHPSRPGLIHSTLPSMANSSDILRRTLQPNLAHLSGGFKDPNQLPEVWDDELHNVVQMTFPTSAPPSCQDLDGSAPSGQTKTEP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0673 496 MobiDBLite consensus disorder prediction 189 215 - -
Ahy1g0673 496 MobiDBLite consensus disorder prediction 473 496 - -
Ahy1g0673 496 Pfam Helix-loop-helix DNA-binding domain 336 384 IPR011598 GO:0046983
Ahy1g0673 496 MobiDBLite consensus disorder prediction 283 319 - -
Ahy1g0673 496 SMART finulus 339 389 IPR011598 GO:0046983
Ahy1g0673 496 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 388 495 IPR024097 GO:0006355
Ahy1g0673 496 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 23 390 IPR024097 GO:0006355
Ahy1g0673 496 MobiDBLite consensus disorder prediction 255 276 - -
Ahy1g0673 496 Gene3D - 330 399 IPR036638 GO:0046983
Ahy1g0673 496 PANTHER BHLH TRANSCRIPTION FACTOR 388 495 - -
Ahy1g0673 496 PANTHER BHLH TRANSCRIPTION FACTOR 23 390 - -
Ahy1g0673 496 Coils Coil 373 393 - -
Ahy1g0673 496 MobiDBLite consensus disorder prediction 180 322 - -
Ahy1g0673 496 CDD bHLH_AtBPE_like 323 393 - -
Ahy1g0673 496 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 394 IPR036638 GO:0046983
Ahy1g0673 496 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 383 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0673 Ahy-Chr1 10267802 10271973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0673 37 472 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 42.184 7.46e-93 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy1g0673 HLH 6.20E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0673 - - ahf:112795912 993.416