Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0631 ATGTTTCCCTTCTTGTTCGAACCCCAAAGCGACGAAGAGATCGAACACTCCGAAGAAGAAGAAGCATCCGAACCAGAATCAGAACCAGGATCCGAACCGGAAGAATCAGAAGGAGAAGAAGAAGAAGACGAACAAGAAGCTTCTAGAATCTCAAAGGAGAAGAAGAAGAAGAAAACACAGTCTCCGTGGGACTTCGCCAAGTACACTGAGTCAGTTGCGGAGGAGCACGCTCGCCGGAGTACAACCTCCGTTGACGAAAAAATCTCCAAAGCATTAAAACAGCGCTCAACACCTCTCGCGGTTCCTTCGCAAAACAACGACGTTGACGACTCATCAGATTCCGAACCTGATAAACAGGAAGATTATAGACCAGATGAAGAAGATGAAGAGGAGGGCAATGCGGCTGATAGCAAGTCCTTTTTCGCTCCTTCTGATGGAGCATCTTTCCATGCGGATTCGTTCTTGCAGCTTCATTTGTCACGGCCTTTGCTCAGGGCTTGTGAGGCCTTGGGGTATGCTAAACCAACGCCAATTCAGGCAGCTTGTATACCATTGGCGTTAAATGGTCGTGATATATGTGGAAGTGCCATTACTGGGTCAGGAAAGACAGCTGCATTTGCACTTCCCACATTAGAGAGGTTGTTGTTCCGTCCTAAACGCATGCATGCAATAAGGGTCCTTATTCTTACACCAACCAGAGAGTTAGCAGTACAAGTTCACAGTATGATAGAGAAGCTTGCTCAATTTACTGATATTAGATGTTGCCTGGTTGTTGGGGGTTTGTCAACGAAGGTGCAAGAAGCTGCTTTGAGATCAATGCCAGACATTGTCGTTGCTACCCCAGGACGTATGATAGACCATTTACGTAATTCTATGTCAGTGGATTTGGATGATCTTGCTGTGCTAATCCTTGATGAGGCGGATCGTCTTTTAGAGCTTGGATTTAGTGCTGAAATTCATGAACTTGTTCGCATGTGTCCCAAGAAAAGGCAGACAATGCTATTTTCAGCAACAATGACTGAGGAGGTTGATGACCTTATTAAATTGTCCCTAACAAAACCTGTGCGTCTTTCTGCTGATCCATCTGCTAAACGGCCTGCAGCCTTGACTGAGGAGGTGGTTAGGATACGAAGATTGCGTGAAGCAAATCAGGAAGCAGTTCTTCTTGCAATGTGCTCCAAAACTTTTACTTCTAAAGTTATCATCTTCAGTGGAACAAAGCAAGCTGCACATAGGTTGAAGATTATATTTGGATTAGCTGGTCTGAAAGCTGCTGAACTTCATGGAAATCTTACTCAAGCCCAGCGCCTTGAAGCTTTGGAACAATTCAGGAAGCAAGAAGTTGACTTTTTGATTGCAACTGATGTGGCTGCCCGTGGCCTTGACATCATAGGTGTTCAAACAGTTATCAACTATGCATGTCCTCGCGATCTTACCAGCTATGTTCATCGAGTGGGTCGTACAGCAAGAGCTGGCCGAGAAGGATGCGCCGTCACATTTGTGACTGATAACGACCGGTCACTTCTAAAAGCAATTGCAAAGAGAGCTGGTTCAAAGCTGAAGAGCCGAATTGTAGCAGAACAATCCATACATAAATGGTCTCATATAATTGAGCAATTGGAGGATCAAATTGCAGAAGTACTTGAAGAAGAGAGGGAAGAAAGAGCCCTAAGAAAAGCTGAAATGGAGGCCACAAAGGCTGAAAACTTGATTGCTCATAAGGAAGAGATCTTTTCCCGCCCCAAAAGAACCTGGTTTGTAACAGAGACAGAAAAGAAGGTTGCTGCAAAAGCAGCAAAGGCATCTATTAATAACGACAAGAGTTCTGGAAAGGTAATAAGTGCTCAGGAAGCTGAAGACCTCAAAATGAAGGAAAAGAGGAAGCGGGAGCGAGAGAAAAATTTGCCGAGAAAGAAGCGTAGAAAATTGGAAGCGGCTAGAGAGATGTTGGAAGATGAAGGAGATGATGACAAACCAGAAGCTAAGGGGGCAAATAAGAAAGAAAAGGGTGGACTTTCACTTGTTGATGTCGCTTATCGACGAGCAAAAGCAGTGAAGGCTGTCAAGAAGGCAATGGATTCAGGCAAGATCGTGAAGAAGAACAAAAAGAATACCAATCGTCCTTCACATAAGTCGTCTTCAAGGACACAGGAGATGCAGGAGCTATTCCAGGCTGACATGAAGGACAAAAAGCCGAAAAGAAGAGGTGCTGGAGCAGGAAAAAAATCTAAGAGTTCGTTCAAGAGCAAGTCAAGGTACAAGCGCAGGTAG 2271 0.4474 MFPFLFEPQSDEEIEHSEEEEASEPESEPGSEPEESEGEEEEDEQEASRISKEKKKKKTQSPWDFAKYTESVAEEHARRSTTSVDEKISKALKQRSTPLAVPSQNNDVDDSSDSEPDKQEDYRPDEEDEEEGNAADSKSFFAPSDGASFHADSFLQLHLSRPLLRACEALGYAKPTPIQAACIPLALNGRDICGSAITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIHELVRMCPKKRQTMLFSATMTEEVDDLIKLSLTKPVRLSADPSAKRPAALTEEVVRIRRLREANQEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQEVDFLIATDVAARGLDIIGVQTVINYACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIHKWSHIIEQLEDQIAEVLEEEREERALRKAEMEATKAENLIAHKEEIFSRPKRTWFVTETEKKVAAKAAKASINNDKSSGKVISAQEAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDEGDDDKPEAKGANKKEKGGLSLVDVAYRRAKAVKAVKKAMDSGKIVKKNKKNTNRPSHKSSSRTQEMQELFQADMKDKKPKRRGAGAGKKSKSSFKSKSRYKRR* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0631 756 MobiDBLite consensus disorder prediction 682 700 - -
Ahy1g0631 756 MobiDBLite consensus disorder prediction 734 756 - -
Ahy1g0631 756 Pfam Helicase conserved C-terminal domain 389 492 IPR001650 -
Ahy1g0631 756 MobiDBLite consensus disorder prediction 598 756 - -
Ahy1g0631 756 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 183 357 IPR014001 -
Ahy1g0631 756 SMART helicmild6 407 492 IPR001650 -
Ahy1g0631 756 MobiDBLite consensus disorder prediction 45 92 - -
Ahy1g0631 756 PANTHER BNAA01G17110D PROTEIN 55 713 - -
Ahy1g0631 756 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 152 180 IPR014014 GO:0003724
Ahy1g0631 756 MobiDBLite consensus disorder prediction 1 141 - -
Ahy1g0631 756 CDD SF2_C_DEAD 369 501 - -
Ahy1g0631 756 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 387 531 IPR001650 -
Ahy1g0631 756 MobiDBLite consensus disorder prediction 12 44 - -
Ahy1g0631 756 Gene3D - 98 359 IPR027417 -
Ahy1g0631 756 Coils Coil 530 577 - -
Ahy1g0631 756 SMART ultradead3 171 372 IPR014001 -
Ahy1g0631 756 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 303 311 IPR000629 -
Ahy1g0631 756 Gene3D - 373 611 IPR027417 -
Ahy1g0631 756 Coils Coil 615 635 - -
Ahy1g0631 756 Pfam DEAD/DEAH box helicase 176 346 IPR011545 GO:0003676|GO:0005524
Ahy1g0631 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 512 IPR027417 -
Ahy1g0631 756 PANTHER RNA HELICASE 55 713 - -
Ahy1g0631 756 CDD DEADc_DDX27 163 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0631 Ahy-Chr1 9771541 9778237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0631 140 509 Eukaryotic Initiation Factors Gene Family AT3G13920 32.976 4.59e-51 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0631 K13181 - gmx:100791233 1046.96