Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0579 ATGCGCAATGCCGTTCAAGCAGTACATATCTCCTTCGTTCGCGGCCATTATCACCGCCAGACGGATTACTTCCTCCACCAGCCGGCCATCGGCGGCTCACTCCCACCACCACCTGTGCCACTCAGACGCTTCTGCCCACTACCACTTGCACCTCCGCTGCGGGCTGGGATCCACCCCAAATACTTTTCCCCCCAAAGCTTCCTCTCCGATCAAAATGGTGGCTCCCAAACCTTCTTTCACCTTTACGCCGCAATGCCTTCAGCCTGCACTACTAACACAACTTGTGAAATACCAGGAGCAACCAAGTTGAAAGCGCCAATTAACTATAAATACAATGATTTAAAAGCTGCAACAAACAATTTTAATGGAGAAAATAGACTAGGAGGAGGTGGCTTTGGCAATGTATACAAGGGAACTCTGAAAAATGGTAAAGTTATTGCGGCGAAGAAATTGTTCTCAGTTCAATCCAAGAAGTTGGAGGATGACTTTGAAAGTGAAGTCAAGTTTCTAAGTAATGTTCATCACCGAAACCTTGTTAGACTCCTTGGATTCTGCAAAAAAGGTCAAGAGAGAATAATAGTTTATGAATACATGACAAATGGCAGTCTTGATAAATTGTTATTTGGTAAGAAAAAAGGTTGGCTAAATTGGAAGCAACGTTATGATATGGTTTTAGGCACAGCAAGGGGATTGGCCTATCTACATGAAGAGTTTTATGTTTCAATCATTCATAGAGATATCAAAAGTGGCAACATCCTCTTAGACCATGAACTTCAGCCCAAAATTTCTGATTTTGGGTTGGCAAGGTTTCTTCCAAGTGACCAATCCAAACTCAATACAAGATTTGCAGGAACATTGGGATATACAGCACCTGAATATGCAATTTATGGCCAATTATCAGAAAAAGTTGATACATACAGCTATGGTATTGTAATTCTAGAAATTATAAGTGGTCGAAAGAGTACTGAAATAGTGAAAAATAATAATAATGATGATGACGACCATGAATATCTTATCAAACAAGCATGGAAACTTTATGAGCAAGGCAAGCACCTAGAGTTAGTGGATAAGAATTTAGACCCTAATGACTATGATGTGGAAGAAGTGAAGAGAGTGATAGAGATTGCTTTAATGTGCACTCAAGCATCACCATCAAAGAGGCCCAAAATGTCTCAAGTAGTAGTCTTACTCACAAGTAAGGCCCAACTTGAGAATTTGCAACCTTCAATGCCTGTATTTATTGAGTCAAACTTGAAATCTCAAGGAAGCAATTTCGGCTCAAATGCTACCGTCTCTGATTCTATTTTATCAGCTAGATGA 1320 0.4053 MRNAVQAVHISFVRGHYHRQTDYFLHQPAIGGSLPPPPVPLRRFCPLPLAPPLRAGIHPKYFSPQSFLSDQNGGSQTFFHLYAAMPSACTTNTTCEIPGATKLKAPINYKYNDLKAATNNFNGENRLGGGGFGNVYKGTLKNGKVIAAKKLFSVQSKKLEDDFESEVKFLSNVHHRNLVRLLGFCKKGQERIIVYEYMTNGSLDKLLFGKKKGWLNWKQRYDMVLGTARGLAYLHEEFYVSIIHRDIKSGNILLDHELQPKISDFGLARFLPSDQSKLNTRFAGTLGYTAPEYAIYGQLSEKVDTYSYGIVILEIISGRKSTEIVKNNNNDDDDHEYLIKQAWKLYEQGKHLELVDKNLDPNDYDVEEVKRVIEIALMCTQASPSKRPKMSQVVVLLTSKAQLENLQPSMPVFIESNLKSQGSNFGSNATVSDSILSAR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0579 439 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Ahy1g0579 439 Gene3D Transferase(Phosphotransferase) domain 1 198 412 - -
Ahy1g0579 439 SUPERFAMILY Protein kinase-like (PK-like) 105 397 IPR011009 -
Ahy1g0579 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Ahy1g0579 439 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 94 422 - -
Ahy1g0579 439 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 94 422 - -
Ahy1g0579 439 Pfam Protein kinase domain 124 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0579 439 ProSiteProfiles Protein kinase domain profile. 121 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0579 439 Gene3D Phosphorylase Kinase; domain 1 86 197 - -
Ahy1g0579 439 SMART serkin_6 121 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0579 439 CDD STKc_IRAK 127 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0579 Ahy-Chr1 8932960 8939588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0579 106 405 Receptor kinase-like Gene Family AT1G56120 49.333 1.58e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy1g0579 Pkinase 8.30E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0579 - - aip:107644200 650.203