Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0578 ATGCTGCAACTCAAGATAGTGACCATAACCGCGATCTGCTTGTGGTGGACATGGCATGATGATCTTCACGGTGCAGTTGTTGTTGTTGCAGATCCACAAACAAATCTAATAAACAAAGGGTGCAGTTCATACTCGCTAAACGGAACAGAGTTGAAGAATTTACATGCCAATGTGAACGGAACTGTTTCAACGATGAGGGGAGAGATAAGGGGAAGTGGAAAGTATTTTGGAACATCACAACAAACAAGGGGAGAGGTAGCAACTTATGCTCTCTTTCAGTGCAGAGATTACCTCTCTCAGAGCGACTGCCTCGCTTGCTTCGACGCCGCCGCCGCGCAGAACCGCAACTGTTCCGATGGTAGTAATGGTGCCAGAGTCACCTTTGACGGCTGTTTTCTAAGATATGACAGTGATATGTTCTACGAGAAGACCACAGAACCTGGGAACGATGGTGTATTATGTGGGAGCATGCCTACATCGGAAACAGCTACTACTTTTGGTGCAACTGTAACTCAGGCTCTGAAGAATCTCCAATTAGCAACACCAAGAATCAAAGGCTTCTTTGCTGCCACTAAAACACTAGTAGCTAGTGGCGGCGGTTCCGTGTATGCTGTCGCGCAATGTGTGGAAACCGCCACTGAAAGCTCTTGCTTGGATTGCTTGACTTTTGGATTTGTTAACTTGAAGAGTAATTGCATTCCCAACATAGATGGTAGGGCTTATAATGCAGGGTGCTTTATGAGATACTCAAATTTACCCTTCTTTTCTGATAACCAAACCATTGACATCACTCCCTATTTAAACCAAGGAGGTTCAAGCAATAAATGGGGCATTATTGGTGGTGTTGTTGGAGGCATTGCTCTTTTTGTGATCTTCTTTGCATTATTTTTCTGGTATAAACGATCCAACAAGAAAAAGGAAGAGGTTCATAGAGGTGATATATTGGGGGCAACTGAATTGAAAGGTCCAATTAATTACAGCTATAATGATTTGAAAGCTGCAACAGAAAATTTCAGTGAAAATAATAAACTTGGAGAAGGAGGCTTTGGCGACGTATACAAGGGAATTCTGGAAAATGGAAAAGTTGTGGCAGTCAAGAAATTGATTCTAAGCCAATCCAAGAAGATGAAGGATGATTTTGAAACTGAAGTAAAACTTATAAGTAATGTGCATCATCGTAACCTTCTTAGACTTCTTGGATGTTGCAATAAAGGCCAAGAGAGAATCCTTGTTTATGAGTATATGGCAAATAAGAGCCTTGACAAATTCTTATTTGGTGACAAAAAAGGTTCCCTTAATTGGAGGCAACGTTACGATATAATTATAGGCACAGCTAAAGGCTTGACATACTTACACGAGGAATTTCATGTTTCTATTATACATCGAGATATAAAAACTAGTAATATTCTTTTGGACGATGAATTTCAACCCAAAATTGCCGATTTCGGATTAGCTAGGCTTTTACCCAGAGATCAATCCCATCTTAGCACAAGATTTGCTGGAACAATGGGATATACTGCACCAGAATATGCTATTCATGGCCAATTATCGGAAAAAACCGATGTTTATAGCTATGGAATTGTGGTTCTAGAAATTATAAGTGGTAAAAAATGTACAGAAGTGAACATTGATATTGACGATGGCCAAGAATACCTTCTTCAACAAGCATGGAAACTATATGAACAAGGCATGCACATTGAGTTAGTGGATGAAAGCATAAACCCTAATGAATATGATAAAGAAGAAGTGAAGAAAATAATAGAAATTGCTTTGTTGTGCACTCAAGCATCAACCACAATGAGACCAGCAATGTCTAAAGTAGTAATCTTACTTAGTAGCAATAATAAGGGCTTATTTGAGAATATTCAACCTTCAATGCCTACTTTTATTGAGTCAAATTTAAAGGCCAGGGAAGATATATTTGCCACAAATAATAATTCCTCTACACCAACTAATTCTAGGGTCAATGTATCCAATGCAACTGTCTCTACTAATTCTATAGTATCAGGTAGATGA 2016 0.3924 MLQLKIVTITAICLWWTWHDDLHGAVVVVADPQTNLINKGCSSYSLNGTELKNLHANVNGTVSTMRGEIRGSGKYFGTSQQTRGEVATYALFQCRDYLSQSDCLACFDAAAAQNRNCSDGSNGARVTFDGCFLRYDSDMFYEKTTEPGNDGVLCGSMPTSETATTFGATVTQALKNLQLATPRIKGFFAATKTLVASGGGSVYAVAQCVETATESSCLDCLTFGFVNLKSNCIPNIDGRAYNAGCFMRYSNLPFFSDNQTIDITPYLNQGGSSNKWGIIGGVVGGIALFVIFFALFFWYKRSNKKKEEVHRGDILGATELKGPINYSYNDLKAATENFSENNKLGEGGFGDVYKGILENGKVVAVKKLILSQSKKMKDDFETEVKLISNVHHRNLLRLLGCCNKGQERILVYEYMANKSLDKFLFGDKKGSLNWRQRYDIIIGTAKGLTYLHEEFHVSIIHRDIKTSNILLDDEFQPKIADFGLARLLPRDQSHLSTRFAGTMGYTAPEYAIHGQLSEKTDVYSYGIVVLEIISGKKCTEVNIDIDDGQEYLLQQAWKLYEQGMHIELVDESINPNEYDKEEVKKIIEIALLCTQASTTMRPAMSKVVILLSSNNKGLFENIQPSMPTFIESNLKAREDIFATNNNSSTPTNSRVNVSNATVSTNSIVSGR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0578 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 635 - -
Ahy1g0578 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Ahy1g0578 671 ProSiteProfiles Gnk2-homologous domain profile. 148 254 IPR002902 -
Ahy1g0578 671 Pfam Salt stress response/antifungal 51 137 IPR002902 -
Ahy1g0578 671 Pfam Salt stress response/antifungal 159 251 IPR002902 -
Ahy1g0578 671 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Ahy1g0578 671 Gene3D Phosphorylase Kinase; domain 1 313 414 - -
Ahy1g0578 671 SUPERFAMILY Protein kinase-like (PK-like) 321 611 IPR011009 -
Ahy1g0578 671 Gene3D Transferase(Phosphotransferase) domain 1 415 623 - -
Ahy1g0578 671 ProSiteProfiles Protein kinase domain profile. 338 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0578 671 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Ahy1g0578 671 Gene3D - 152 254 IPR038408 -
Ahy1g0578 671 Gene3D - 33 140 IPR038408 -
Ahy1g0578 671 SMART serkin_6 338 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0578 671 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 25 635 - -
Ahy1g0578 671 CDD STKc_IRAK 344 608 - -
Ahy1g0578 671 Pfam Protein kinase domain 339 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0578 Ahy-Chr1 8884800 8891799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0578 57 639 Receptor kinase-like Gene Family AT1G70520 37.605 3.94e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy1g0578 Pkinase 6.40E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0578 - - gmx:100813585 817.379